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  1. Article

    Open Access

    Phytochromes transmit photoperiod information via the evening complex in Brachypodium

    Daylength is a key seasonal cue for animals and plants. In cereals, photoperiodic responses are a major adaptive trait, and alleles of clock genes such as PHOTOPERIOD1 (PPD1) and EARLY FLOWERING3 (ELF3) have been...

    Mingjun Gao, Yunlong Lu, Feng Geng, Cornelia Klose, Anne-Marie Staudt in Genome Biology (2023)

  2. Article

    Correction to: ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy

    The correct name of the 3rd Author is presented in this paper.

    Noémie Vimont, Fu **ang Quah, David Guillaume-Schöpfer in Tree Genetics & Genomes (2020)

  3. No Access

    Article

    A prion-like domain in ELF3 functions as a thermosensor in Arabidopsis

    Temperature controls plant growth and development, and climate change has already altered the phenology of wild plants and crops1. However, the mechanisms by which plants sense temperature are not well understood...

    Jae-Hoon Jung, Antonio D. Barbosa, Stephanie Hutin, Janet R. Kumita, Mingjun Gao in Nature (2020)

  4. No Access

    Article

    An RNA thermoswitch regulates daytime growth in Arabidopsis

    Temperature is a major environmental cue affecting plant growth and development. Plants often experience higher temperatures in the context of a 24 h day–night cycle, with temperatures peaking in the middle of...

    Betty Y. W. Chung, Martin Balcerowicz, Marco Di Antonio, Katja E. Jaeger in Nature Plants (2020)

  5. Article

    Open Access

    ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy

    Chromatin immunoprecipitation-sequencing (ChIP-seq) is a robust technique to study interactions between proteins, such as histones or transcription factors and DNA. This technique in combination with RNA-seque...

    Noémie Vimont, Fu **ang Quah, David Guillaume Schöepfer in Tree Genetics & Genomes (2019)

  6. Article

    Open Access

    From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy

    Bud dormancy is a crucial stage in perennial trees and allows survival over winter to ensure optimal flowering and fruit production. Recent work highlighted physiological and molecular events occurring during ...

    Noémie Vimont, Mathieu Fouché, José Antonio Campoy, Meixuezi Tong in BMC Genomics (2019)

  7. No Access

    Article

    The evening complex coordinates environmental and endogenous signals in Arabidopsis

    Plants maximize their fitness by adjusting their growth and development in response to signals such as light and temperature. The circadian clock provides a mechanism for plants to anticipate events such as su...

    Daphne Ezer, Jae-Hoon Jung, Hui Lan, Surojit Biswas, Laura Gregoire in Nature Plants (2017)

  8. Article

    Open Access

    Tradict enables accurate prediction of eukaryotic transcriptional states from 100 marker genes

    Transcript levels are a critical determinant of the proteome and hence cellular function. Because the transcriptome is an outcome of the interactions between genes and their products, it may be accurately repr...

    Surojit Biswas, Konstantin Kerner in Nature Communications (2017)

  9. No Access

    Article

    Molecular and genetic control of plant thermomorphogenesis

    Temperature is a major factor governing the distribution and seasonal behaviour of plants. Being sessile, plants are highly responsive to small differences in temperature and adjust their growth and developmen...

    Marcel Quint, Carolin Delker, Keara A. Franklin, Philip A. Wigge in Nature Plants (2016)

  10. Article

    Open Access

    Thermal stress effects on grain yield in Brachypodium distachyon occur via H2A.Z-nucleosomes

    Crop plants are highly sensitive to ambient temperature, with a 1 ºC difference in temperature sufficient to affect development and yield. Monocot crop plants are particularly vulnerable to higher temperatures...

    Scott A Boden, Monika Kavanová, E Jean Finnegan, Philip A Wigge in Genome Biology (2013)

  11. No Access

    Article

    Transcription factor PIF4 controls the thermosensory activation of flowering

    A novel mechanism by which warming temperatures can directly activate flowering in the model plant Arabidopsis thaliana.

    S. Vinod Kumar, Doris Lucyshyn, Katja E. Jaeger, Enriqueta Alós, Elizabeth Alvey in Nature (2012)

  12. No Access

    Article

    Florigen takes two to tango

    A recent flurry of activity has defined the protein FLOWERING LOCUS T (FT) as a mobile signal or 'florigen' that induces flowering. A new study has shown that a 14-3-3 protein links FT to a transcription facto...

    Joshua S Mylne, Philip A Wigge in Nature Chemical Biology (2011)

  13. Article

    Open Access

    The dynamic genome of Hydra

    Hydra, first described by Anton van Leeuwenhoek in a letter to the Royal Society in 1702, has been studied by biologists for centuries and now is an important model for work on axial patterning, stem cell biology...

    Jarrod A. Chapman, Ewen F. Kirkness, Oleg Simakov, Steven E. Hampson in Nature (2010)

  14. No Access

    Article

    Red sky in the morning, shepherd's warning

    A new study provides insight into the way plants integrate information from the environment to anticipate the onset of winter. Plants are able to combine information about light quality and ambient temperature...

    Vinod Kumar, Philip A Wigge in Nature Genetics (2007)