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  1. Article

    Open Access

    Reproductive Phenology of the Eastern Oyster, Crassostrea virginica (Gmelin, 1791), Along a Temperate Estuarine Salinity Gradient

    Low salinity can negatively affect reproduction in estuarine bivalves. The spatial and temporal extents of these effects are important to inform models of population dynamics, environmental risk assessments, r...

    Kaili M. Gregory, Katherine McFarland, Matthew P. Hare in Estuaries and Coasts (2023)

  2. Article

    Open Access

    Author Correction: Large-scale variation in density of an aquatic ecosystem indicator species

    An amendment to this paper has been published and can be accessed via a link at the top of the paper.

    Chris Sutherland, Angela K. Fuller, J. Andrew Royle, Matthew P. Hare in Scientific Reports (2019)

  3. Article

    Open Access

    Crossing the chasm: a ‘tube-map’ for agent-based social simulation of policy scenarios in spatially-distributed systems

    Agent based models (ABMs) simulate actions and interactions of autonomous agents/groups and their effect on systems as a whole, accounting for learning without assuming perfect rationality or complete knowledg...

    J. Gareth Polhill, Jiaqi Ge, Matthew P. Hare, Keith B. Matthews in GeoInformatica (2019)

  4. Article

    Open Access

    Large-scale variation in density of an aquatic ecosystem indicator species

    Monitoring indicator species is a pragmatic approach to natural resource assessments, especially when the link between the indicator species and ecosystem state is well justified. However, conducting ecosystem...

    Chris Sutherland, Angela K. Fuller, J. Andrew Royle, Matthew P. Hare in Scientific Reports (2018)

  5. No Access

    Article

    Confirmation of a unique and genetically diverse ‘heritage’ strain of brook trout (Salvelinus fontinalis) in a remote Adirondack watershed

    In fisheries management, understanding anthropogenic impacts on fish population genetic structure is essential because genetic diversity is a fundamental attribute contributing to a species’ evolutionary capac...

    Spencer A. Bruce, Matthew P. Hare, Matthew W. Mitchell in Conservation Genetics (2018)

  6. No Access

    Article

    Microsatellite primers designed from pyrosequences to compare two subspecies of surf clam, Spisula solidissima

    It was recently discovered that two cryptic subspecies of surf clam co-occur in near-shore waters of southern New England, Spisula solidissima solidissima and Spisula solidissima similis. The latter form was prev...

    Matthew P. Hare, Harmony Borchardt-Wier in Conservation Genetics Resources (2014)

  7. Article

    Open Access

    Transcriptomic analysis of candidate osmoregulatory genes in the eastern oyster Crassostrea virginica

    The eastern oyster, Crassostrea virginica, is a euryhaline species that can thrive across a wide range of salinities (5-35). As with all estuarine species, individual oysters must be able to regulate their osmoti...

    Laura E Eierman, Matthew P Hare in BMC Genomics (2014)

  8. No Access

    Article

    Genetic relationships of the marine invasive crab parasite Loxothylacus panopaei: an analysis of DNA sequence variation, host specificity, and distributional range

    Host specificity is a key variable of the niche breath of parasites that can be an important determinant of a parasite’s ability to invade new areas. There is increasing evidence that many parasite species may...

    Inken Kruse, Matthew P. Hare, Anson H. Hines in Biological Invasions (2012)

  9. No Access

    Article

    The Emergence of an Endangered Species: Evolution and Phylogeny of the Trachypithecus geei of Bhutan

    Golden langurs (Trachypithecus geei) are an endangered primate species in Bhutan. We discuss their evolution in terms of phylogeny, ecology, and biogeography. We test the hypothesis that rivers and mountains in B...

    Tashi Wangchuk, David W. Inouye, Matthew P. Hare in International Journal of Primatology (2008)

  10. No Access

    Article

    A genetic test for recruitment enhancement in Chesapeake Bay oysters, Crassostrea virginica, after population supplementation with a disease tolerant strain

    Many of the methods currently employed to restore Chesapeake Bay populations of the eastern oyster, Crassostrea virginica, assume closed recruitment in certain sub-estuaries despite planktonic larval durations of...

    Matthew P. Hare, Standish K. Allen Jr., Paulette Bloomer in Conservation Genetics (2006)