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  1. MBD1 protects replication fork stability by recruiting PARP1 and controlling transcription-replication conflicts

    The replication-stress response is essential to ensure the faithful transmission of genetic information to daughter cells. Although several...

    Guihui Yu, Yundong **ong, ... Jiadong Wang in Cancer Gene Therapy
    Article 10 November 2023
  2. Replication fork uncoupling causes nascent strand degradation and fork reversal

    Genotoxins cause nascent strand degradation (NSD) and fork reversal during DNA replication. NSD and fork reversal are crucial for genome stability...

    Tamar Kavlashvili, Wenpeng Liu, ... James M. Dewar in Nature Structural & Molecular Biology
    Article 02 January 2023
  3. H2AX promotes replication fork degradation and chemosensitivity in BRCA-deficient tumours

    Histone H2AX plays a key role in DNA damage signalling in the surrounding regions of DNA double-strand breaks (DSBs). In response to DNA damage, H2AX...

    Diego Dibitetto, Martin Liptay, ... Sven Rottenberg in Nature Communications
    Article Open access 24 May 2024
  4. Gene duplication and deletion caused by over-replication at a fork barrier

    Replication fork stalling can provoke fork reversal to form a four-way DNA junction. This remodelling of the replication fork can facilitate repair,...

    Judith Oehler, Carl A. Morrow, Matthew C. Whitby in Nature Communications
    Article Open access 25 November 2023
  5. TFIP11 promotes replication fork reversal to preserve genome stability

    Replication fork reversal, a critical protective mechanism against replication stress in higher eukaryotic cells, is orchestrated via a series of...

    Junliang Chen, Mingjie Wu, ... Ting Liu in Nature Communications
    Article Open access 10 February 2024
  6. Nuclear actin polymerization rapidly mediates replication fork remodeling upon stress by limiting PrimPol activity

    Cells rapidly respond to replication stress actively slowing fork progression and inducing fork reversal. How replication fork plasticity is achieved...

    Maria Dilia Palumbieri, Chiara Merigliano, ... Massimo Lopes in Nature Communications
    Article Open access 28 November 2023
  7. Genome-wide identification of replication fork stalling/pausing sites and the interplay between RNA Pol II transcription and DNA replication progression

    Background

    DNA replication progression can be affected by the presence of physical barriers like the RNA polymerases, leading to replication stress...

    Patricia Rojas, Jianming Wang, ... Marco Saponaro in Genome Biology
    Article Open access 21 May 2024
  8. Replication fork binding triggers structural changes in the PriA helicase that govern DNA replication restart in E. coli

    Bacterial replisomes often dissociate from replication forks before chromosomal replication is complete. To avoid the lethal consequences of such...

    Alexander T. Duckworth, Peter L. Ducos, ... James L. Keck in Nature Communications
    Article Open access 11 May 2023
  9. Regulation of Rad52-dependent replication fork recovery through serine ADP-ribosylation of PolD3

    Although Poly(ADP-ribose)-polymerases (PARPs) are key regulators of genome stability, how site-specific ADP-ribosylation regulates DNA repair is...

    Frederick Richards, Marta J. Llorca-Cardenosa, ... Nicholas D. Lakin in Nature Communications
    Article Open access 18 July 2023
  10. UFL1 triggers replication fork degradation by MRE11 in BRCA1/2-deficient cells

    The stabilization of stalled forks has emerged as a crucial mechanism driving resistance to poly(ADP-ribose) polymerase (PARP) inhibitors in...

    Tian Tian, Junliang Chen, ... Ting Liu in Nature Chemical Biology
    Article 22 April 2024
  11. Dynamic de novo heterochromatin assembly and disassembly at replication forks ensures fork stability

    Chromatin is dynamically reorganized when DNA replication forks are challenged. However, the process of epigenetic reorganization and its implication...

    Vincent Gaggioli, Calvin S. Y. Lo, ... Nitika Taneja in Nature Cell Biology
    Article Open access 06 July 2023
  12. Synergism between CMG helicase and leading strand DNA polymerase at replication fork

    The replisome that replicates the eukaryotic genome consists of at least three engines: the Cdc45-MCM-GINS (CMG) helicase that separates duplex DNA...

    Zhichun Xu, Jianrong Feng, ... Yuanliang Zhai in Nature Communications
    Article Open access 20 September 2023
  13. Interferon restores replication fork stability and cell viability in BRCA-defective cells via ISG15

    DNA replication and repair defects or genotoxic treatments trigger interferon (IFN)-mediated inflammatory responses. However, whether and how IFN...

    Ramona N. Moro, Uddipta Biswas, ... Lorenza Penengo in Nature Communications
    Article Open access 02 October 2023
  14. Genome-wide measurement of DNA replication fork directionality and quantification of DNA replication initiation and termination with Okazaki fragment sequencing

    Studying the dynamics of genome replication in mammalian cells has been historically challenging. To reveal the location of replication initiation...

    **a Wu, Yaqun Liu, ... Nataliya Petryk in Nature Protocols
    Article 18 January 2023
  15. Monitoring and quantifying replication fork dynamics with high-throughput methods

    Before each cell division, eukaryotic cells must replicate their chromosomes to ensure the accurate transmission of genetic information. Chromosome...

    Nora Fajri, Nataliya Petryk in Communications Biology
    Article Open access 14 June 2024
  16. Nuclear myosin VI maintains replication fork stability

    The actin cytoskeleton is of fundamental importance for cellular structure and plasticity. However, abundance and function of filamentous actin in...

    Jie Shi, Kristine Hauschulte, ... Hans-Peter Wollscheid in Nature Communications
    Article Open access 24 June 2023
  17. The COMPASS subunit Spp1 protects nascent DNA at the Tus/Ter replication fork barrier by limiting DNA availability to nucleases

    Homologous recombination factors play a crucial role in protecting nascent DNA during DNA replication, but the role of chromatin in this process is...

    Nagham Ghaddar, Yves Corda, ... Vincent Géli in Nature Communications
    Article Open access 05 September 2023
  18. Parental histone transfer caught at the replication fork

    In eukaryotes, DNA compacts into chromatin through nucleosomes 1 , 2 . Replication of the eukaryotic genome must be coupled to the transmission of the...

    Ningning Li, Yuan Gao, ... Yuanliang Zhai in Nature
    Article 06 March 2024
  19. Compartmentalization of the replication fork by single-stranded DNA-binding protein regulates translesion synthesis

    Processivity clamps tether DNA polymerases to DNA, allowing their access to the primer–template junction. In addition to DNA replication, DNA...

    Seungwoo Chang, Elizabeth S. Thrall, ... Joseph J. Loparo in Nature Structural & Molecular Biology
    Article 20 September 2022
  20. The chromatin-associated lncREST ensures effective replication stress response by promoting the assembly of fork signaling factors

    Besides the well-characterized protein network involved in the replication stress response, several regulatory RNAs have been shown to play a role in...

    Luisa Statello, José Miguel Fernandez-Justel, ... Maite Huarte in Nature Communications
    Article Open access 01 February 2024
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