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  1. Genomic sequencing revealed recombination event between clade 1 and clade 2 occurs in circulating varicella-zoster virus in China

    Varicella-zoster virus (VZV), a member of the Alphaherpesvirinae subfamily, causes varicella in primary infections and establishing a latent stage in...

    Jia Li, Dan Wang, ... Wei Ye in Brazilian Journal of Microbiology
    Article 06 December 2023
  2. Comammox Nitrospira clade A recovers faster than clade B after cyanobacteria outbreak in the Three Gorges tributary, China

    Purpose

    Comammox Nitrospira can complete nitrification independently, and they are important participants in the nitrogen cycle. In this study, we...

    Shuang Liu, Yuchun Wang, ... Jianwei Zhao in Journal of Soils and Sediments
    Article 09 March 2023
  3. 2019–2020 H1N1 clade A5a.1 viruses have better in vitro fitness compared with the co-circulating A5a.2 clade

    Surveillance for emerging human influenza virus clades is important for identifying changes in viral fitness and assessing antigenic similarity to...

    Nicholas J. Swanson, Paula Marinho, ... Andrew Pekosz in Scientific Reports
    Article Open access 23 June 2023
  4. Cyanophages from a less virulent clade dominate over their sister clade in global oceans

    Environmental virus communities are highly diverse. However, the infection physiology underlying the evolution of diverse phage lineages and their...

    Ilia Maidanik, Shay Kirzner, ... Debbie Lindell in The ISME Journal
    Article Open access 20 June 2022
  5. Pan-Chinchillidae, a Once Diverse Clade

    Pan-Chinchillidae is a clade of caviomorph rodents that includes extant chinchillas (Chinchilla spp.) and mountain vizcachas (Lagidium spp.) within...
    Luciano Luis Rasia in Plains Vizcachas
    Chapter 2024
  6. Clade density and the evolution of diversity-dependent diversification

    The assumption of an ecological limit to the number of species in a given region is frequently invoked in evolutionary studies, yet its empirical...

    Marcio R. Pie, Raquel Divieso, Fernanda S. Caron in Nature Communications
    Article Open access 29 July 2023
  7. Synthetic Biology in the Candida (CTG) Clade

    The continuous bio-race to find an ideal microbial chassis opens the path toward the Candida CTG clade to enter the competition. Unexpectedly, this...
    Dalal Kasir, Sébastien Besseau, ... Nicolas Papon in Synthetic Biology of Yeasts
    Chapter 2022
  8. Protein Repeats Show Clade-Specific Volatility in Aves

    Abstract

    Protein repeats are a source of rapid evolutionary and functional novelty. Repeats are crucial in development, neurogenesis, immunity, and...

    S. Sharma, L. Teekas, N. Vijay in Molecular Biology
    Article 07 December 2023
  9. QTL map** of resistance to Pseudoperonospora cubensis clade 2, mating type A1, in Cucumis melo and dual-clade marker development

    Key message

    This is the first identification of QTLs underlying resistance in Cucumis melo to an isolate of Pseudoperonospora cubensis identified as...

    Sean M. Toporek, Sandra E. Branham, ... W. Patrick Wechter in Theoretical and Applied Genetics
    Article 03 April 2023
  10. Contribution of host species and pathogen clade to snake fungal disease hotspots in Europe

    Infectious diseases are influenced by interactions between host and pathogen, and the number of infected hosts is rarely homogenous across the...

    Gaëlle Blanvillain, Jeffrey M. Lorch, ... Joseph R. Hoyt in Communications Biology
    Article Open access 10 April 2024
  11. Genomics-based identification of a cold adapted clade in Deinococcus

    Background

    Microbes in the cold polar and alpine environments play a critical role in feedbacks that amplify the effects of climate change. Defining...

    Liang Shen, Jiayu Hu, ... Yongqin Liu in BMC Biology
    Article Open access 02 July 2024
  12. Sex differences in cognitive function among people with HIV-1 clade C infection in Northern India

    Human immunodeficiency virus-1 (HIV-1) clade C is the most prevalent form of HIV-1 comprising nearly 46% of global infections and is the dominant...

    Anchal Sharma, Manju Mohanty, ... Mahendra Kumar in Journal of NeuroVirology
    Article 12 September 2023
  13. CoPoP liposomes displaying stabilized clade C HIV-1 Env elicit tier 2 multiclade neutralization in rabbits

    One of the strategies towards an effective HIV-1 vaccine is to elicit broadly neutralizing antibody responses that target the high HIV-1 Env...

    Annemart Koornneef, Kanika Vanshylla, ... Frank Wegmann in Nature Communications
    Article Open access 11 April 2024
  14. Diversity and evolution of leaflet anatomical characters in the Pterocarpus clade (Fabaceae: Papilionoideae)

    The Pterocarpus clade includes 23 genera previously attributed to different Fabaceae tribes. The recent rearrangements of many genera in the clade do...

    Jean David Varilla González, Flávio Macedo Alves, ... Rosani do Carmo de Oliveira Arruda in Journal of Plant Research
    Article 08 April 2023
  15. Cultivation of marine bacteria of the SAR202 clade

    Bacteria of the SAR202 clade, within the phylum Chloroflexota , are ubiquitously distributed in the ocean but have not yet been cultivated in the lab....

    Yeonjung Lim, Ji-Hui Seo, ... Jang-Cheon Cho in Nature Communications
    Article Open access 22 August 2023
  16. The nomenclature of the Catostemma clade (Malvaceae/Bombacoideae/Adansonieae)

    Aguiaria , Catostemma , and Scleronema (Malvaceae) are restricted to Amazonia, and comprise 20 accepted (and one uncertain) species that are typically...

    Carlos Daniel Miranda Ferreira, William Surprison Alverson, ... José Fernando A. Baumgratz in Brittonia
    Article 29 March 2023
  17. Chloroplast genome characteristics and phylogeny of the sinodielsia clade (apiaceae: apioideae)

    Background

    The Sinodielsia clade of the subfamily Apioideae (Apiacieae) was established in 2008, and it is composed of 37 species from 17 genera. Its...

    Long Weng, Yunhui Jiang, ... Shaotian Chen in BMC Plant Biology
    Article Open access 29 May 2023
  18. Development of a nucleoside-modified mRNA vaccine against clade 2.3.4.4b H5 highly pathogenic avian influenza virus

    mRNA lipid nanoparticle (LNP) vaccines would be useful during an influenza virus pandemic since they can be produced rapidly and do not require the...

    Colleen Furey, Gabrielle Scher, ... Scott E. Hensley in Nature Communications
    Article Open access 23 May 2024
  19. Phylogenomic analysis of the Ponticus clade: strains isolated from the spotted rose snapper (Lutjanus guttatus)

    The family Vibrionaceae is classified into many clades based on their phylogenetic relationships. The Ponticus clade is one of its clades and...

    Alejandra de Jesús Chavarín-Meza, Bruno Gómez-Gil, Adrián González-Castillo in Antonie van Leeuwenhoek
    Article 20 March 2024
  20. Identification of a deep-branching thermophilic clade sheds light on early bacterial evolution

    It has been proposed that early bacteria, or even the last universal common ancestor of all cells, were thermophilic. However, research on the origin...

    Hao Leng, Yinzhao Wang, ... **ang **ao in Nature Communications
    Article Open access 19 July 2023
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