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  1. SfuPKS2, a novel type III polyketide synthase from Sargassum fusiforme, shows high substrate specificity

    A type III polyketide synthase (SfuPKS2) from the edible seaweed Sargassum fusiforme was cloned and biochemically characterized. SfuPKS2 can only...

    Jia-Min Xu, Yi-Cheng Xu, ... Nan Li in Journal of Applied Phycology
    Article 08 May 2024
  2. Rational engineering of an elevator-type metal transporter ZIP8 reveals a conditional selectivity filter critically involved in determining substrate specificity

    Engineering of transporters to alter substrate specificity as desired holds great potential for applications, including metabolic engineering....

    Yuhan Jiang, Zhen Li, ... Jian Hu in Communications Biology
    Article Open access 26 July 2023
  3. Flexible active-site loops fine-tune substrate specificity of hyperthermophilic metallo-oxidases

    Hyperthermophilic (‘superheat-loving’) archaea found in high-temperature environments such as Pyrobaculum aerophilum contain multicopper oxidases...

    Vânia Brissos, Patrícia T. Borges, ... Lígia O. Martins in JBIC Journal of Biological Inorganic Chemistry
    Article Open access 16 January 2024
  4. Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis

    Trichothecenes are a structurally diverse family of toxic secondary metabolites produced by certain species of multiple fungal genera. All...

    Rosa E. Cardoza, Susan P. McCormick, ... Santiago Gutiérrez in Applied Microbiology and Biotechnology
    Article Open access 06 January 2024
  5. Determinants of substrate specificity in a catalytically diverse family of acyl-ACP thioesterases from plants

    Background

    ACYL-LIPID THIOESTERASES (ALTs) are a subclass of plastid-localized, fatty acyl-acyl carrier protein (ACP) thioesterase enzymes from...

    Rebecca S. Kalinger, Owen Rowland in BMC Plant Biology
    Article Open access 02 January 2023
  6. CAND1 inhibits Cullin-2-RING ubiquitin ligases for enhanced substrate specificity

    Through targeting essential cellular regulators for ubiquitination and serving as a major platform for discovering proteolysis-targeting chimera...

    Kankan Wang, Stephanie Diaz, ... **ng Liu in Nature Structural & Molecular Biology
    Article 04 January 2024
  7. Characterization of Prolyl-4-Hydroxylase Substrate Specificity Using Pichia pastoris as an Efficient Eukaryotic Expression System

    The use of eukaryotic expression systems facilitates the heterologous expression of complex eukaryotic proteins in their post-translationally...
    Gerith Elsäßer, Tim Seidl, ... Nils Stührwohldt in Plant Peptide Hormones and Growth Factors
    Protocol 2024
  8. Modification of substrate specificity of l-arginine oxidase for detection of l-citrulline

    Enzymatic detection of citrulline, a potential biomarker for various diseases, is beneficial. However, determining citrulline levels requires...

    Kei Yamamoto, Yosuke Masakari, ... Kotaro Ito in AMB Express
    Article Open access 03 December 2023
  9. Map** the determinants of catalysis and substrate specificity of the antibiotic resistance enzyme CTX-M β-lactamase

    CTX-M β-lactamases are prevalent antibiotic resistance enzymes and are notable for their ability to rapidly hydrolyze the extended-spectrum...

    Allison Judge, Liya Hu, ... Timothy Palzkill in Communications Biology
    Article Open access 12 January 2023
  10. Technical pipeline for screening microbial communities as a function of substrate specificity through fluorescent labelling

    The study of specific glycan uptake and metabolism is an effective tool in aiding with the continued unravelling of the complexities in the human gut...

    Shaun Leivers, Leidy Lagos, ... Bjørge Westereng in Communications Biology
    Article Open access 11 May 2022
  11. Glycogen debranching pathway deduced from substrate specificity of glycogen debranching enzyme

    Glycogen debranching enzyme (GDE) is bifunctional in that it exhibits both 4-α-glucanotransferase and amylo-α-1,6-glucosidase activity at two...

    Ayato Ikeda, Yasushi Makino, Hiroshi Matsubara in Glycoconjugate Journal
    Article 22 February 2022
  12. Oligomeric Structure of Yeast and Other Invertases Governs Specificity

    Invertases, or β-fructofuranosidases, are metabolic enzymes widely distributed among plants and microorganisms that hydrolyze sucrose and release...
    Elena Jiménez-Ortega, Julia Sanz-Aparicio in Macromolecular Protein Complexes V
    Chapter 2024
  13. Modification of the substrate specificity of leucine dehydrogenase by site-directed mutagenesis based on biocomputing strategies

    Synthesis of chiral amines by amine dehydrogenase has the advantages of environmental friendliness, high stereoselectivity, and mild reaction...

    Jiapeng Lu, Zengyu Wang, ... Wei Luo in Systems Microbiology and Biomanufacturing
    Article 14 July 2022
  14. Discovery of NSD2 non-histone substrates and design of a super-substrate

    The human protein lysine methyltransferase NSD2 catalyzes dimethylation at H3K36. It has very important roles in development and disease but many...

    Sara Weirich, Denis Kusevic, ... Albert Jeltsch in Communications Biology
    Article Open access 08 June 2024
  15. Identification and recombinant production of a flavonoid glucosyltransferase with broad substrate specificity from Vaccinium corymbosum

    Glucosyltransferases (GTs) are enzymes that use UDP-glucose to glucosylate wide variety of substrates, including the aglycones of anthocyanins....

    Article 26 February 2024
  16. A Novel Thermo-Alkaline Stable GDSL/SGNH Esterase with Broad Substrate Specificity from a Deep-Sea Pseudomonas sp.

    Marine environments harbor a plethora of microorganisms that represent a valuable source of new biomolecules of biotechnological interest. In...

    José Luis Rodríguez-Mejía, Itzel Anahí Hidalgo-Manzano, ... Liliana Pardo-López in Marine Biotechnology
    Article Open access 01 May 2024
  17. A survey of substrate specificity among Auxiliary Activity Family 5 copper radical oxidases 

    There is significant contemporary interest in the application of enzymes to replace or augment chemical reagents toward the development of more...

    Maria E. Cleveland, Yann Mathieu, ... Harry Brumer in Cellular and Molecular Life Sciences
    Article 05 November 2021
  18. Effect of Gln469 on the Activity and Substrate Specificity of the N-glycosyltransferase from Actinobacillus pleuropneumoniae

    Abstract

    N-Glycosyltransferase from Actinobacillus pleuropneumoniae (ApNGT) belongs to a novel class of N-glycosylation-catalyzing enzymes and has...

    M. Gao, Y. Fan, J. Cheng in Applied Biochemistry and Microbiology
    Article 25 November 2021
  19. Enhanced catalytic efficiency and substrate specificity of Streptomyces griseus trypsin by evolution-guided mutagenesis

    Streptomyces griseus trypsin (SGT) is a bacteria-sourced trypsin that could be potentially applied to industrial insulin productions. However, SGT...

    **gcheng Shi, Chaofan Duan, ... Zhen Kang in Systems Microbiology and Biomanufacturing
    Article 23 May 2022
  20. Structural mechanisms of autoinhibition and substrate recognition by the ubiquitin ligase HACE1

    Ubiquitin ligases (E3s) are pivotal specificity determinants in the ubiquitin system by selecting substrates and decorating them with distinct...

    Jonas Düring, Madita Wolter, ... Sonja Lorenz in Nature Structural & Molecular Biology
    Article Open access 08 February 2024
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