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Showing 1-20 of 4,970 results
  1. The virome of the last eukaryotic common ancestor and eukaryogenesis

    All extant eukaryotes descend from the last eukaryotic common ancestor (LECA), which is thought to have featured complex cellular organization. To...

    Mart Krupovic, Valerian V. Dolja, Eugene V. Koonin in Nature Microbiology
    Article 01 May 2023
  2. Reconstruction of the last bacterial common ancestor from 183 pangenomes reveals a versatile ancient core genome

    Background

    Cumulative sequencing efforts have yielded enough genomes to construct pangenomes for dozens of bacterial species and elucidate...

    Jason C. Hyun, Bernhard O. Palsson in Genome Biology
    Article Open access 08 August 2023
  3. Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components

    Over millions of years, eukaryotes evolved from unicellular to multicellular organisms with increasingly complex genomes and sophisticated gene...

    Jorge Hernández-García, Borja Diego-Martin, ... Javier Gallego-Bartolomé in Communications Biology
    Article Open access 06 June 2022
  4. Origins and Functional Significance of Eukaryotic Protein Folds

    Folds are the architecture and topology of a protein domain. Categories of folds are very few compared to the astronomical number of sequences....

    Martin Romei, Mathilde Carpentier, ... Guillaume Lecointre in Journal of Molecular Evolution
    Article 07 December 2023
  5. The spread of the first introns in proto-eukaryotic paralogs

    Spliceosomal introns are a unique feature of eukaryotic genes. Previous studies have established that many introns were present in the protein-coding...

    Julian Vosseberg, Michelle Schinkel, ... Berend Snel in Communications Biology
    Article Open access 19 May 2022
  6. Self-assembling viral histones are evolutionary intermediates between archaeal and eukaryotic nucleosomes

    Nucleosomes are DNA–protein complexes composed of histone proteins that form the basis of eukaryotic chromatin. The nucleosome was a key innovation...

    Nicholas A. T. Irwin, Thomas A. Richards in Nature Microbiology
    Article Open access 28 May 2024
  7. On Protein Loops, Prior Molecular States and Common Ancestors of Life

    The principle of continuity demands the existence of prior molecular states and common ancestors responsible for extant macromolecular structure....

    Kelsey Caetano-Anollés, M. Fayez Aziz, ... Gustavo Caetano-Anollés in Journal of Molecular Evolution
    Article Open access 23 April 2024
  8. A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

    Histones and associated chromatin proteins have essential functions in eukaryotic genome organization and regulation. Despite this fundamental role...

    Xavier Grau-Bové, Cristina Navarrete, ... Arnau Sebé-Pedrós in Nature Ecology & Evolution
    Article 09 June 2022
  9. Concepts of the last eukaryotic common ancestor

    Insight into the last eukaryotic common ancestor (LECA) is central to any phylogeny-based reconstruction of early eukaryotic evolution. Increasing...

    Maureen A. O’Malley, Michelle M. Leger, ... Iñaki Ruiz-Trillo in Nature Ecology & Evolution
    Article 18 February 2019
  10. Heimdallarchaea encodes profilin with eukaryotic-like actin regulation and polyproline binding

    It is now widely accepted that the first eukaryotic cell emerged from a merger of an archaeal host cell and an alphaproteobacterium. However, the...

    Sabeen Survery, Fredrik Hurtig, ... Celestine N. Chi in Communications Biology
    Article Open access 01 September 2021
  11. Global patterns and rates of habitat transitions across the eukaryotic tree of life

    The successful colonization of new habitats has played a fundamental role during the evolution of life. Salinity is one of the strongest barriers for...

    Mahwash Jamy, Charlie Biwer, ... Fabien Burki in Nature Ecology & Evolution
    Article Open access 04 August 2022
  12. Conservation and similarity of bacterial and eukaryotic innate immunity

    Pathogens are ubiquitous and a constant threat to their hosts, which has led to the evolution of sophisticated immune systems in bacteria, archaea...

    Hannah E. Ledvina, Aaron T. Whiteley in Nature Reviews Microbiology
    Article 28 February 2024
  13. Viperin immunity evolved across the tree of life through serial innovations on a conserved scaffold

    Evolutionary arms races between cells and viruses drive the rapid diversification of antiviral genes in diverse life forms. Recent discoveries have...

    Helena Shomar, Héloïse Georjon, ... Aude Bernheim in Nature Ecology & Evolution
    Article 04 July 2024
  14. Discovery and Study of Transmembrane Rotary Ion-Translocating Nano-Motors: F-ATPase/Synthase of Mitochondria/Bacteria and V-ATPase of Eukaryotic Cells

    Abstract

    This review discusses the history of discovery and study of the operation of the two rotary ion-translocating ATPase nano-motors: (i)...

    Vladimir Marshansky in Biochemistry (Moscow)
    Article 15 August 2022
  15. Uncoupled evolution of the Polycomb system and deep origin of non-canonical PRC1

    Polycomb group proteins, as part of the Polycomb repressive complexes, are essential in gene repression through chromatin compaction by canonical...

    Bastiaan de Potter, Maximilian W. D. Raas, ... Berend Snel in Communications Biology
    Article Open access 10 November 2023
  16. Structural and biochemical evidence for the emergence of a calcium-regulated actin cytoskeleton prior to eukaryogenesis

    Charting the emergence of eukaryotic traits is important for understanding the characteristics of organisms that contributed to eukaryogenesis....

    Caner Akıl, Linh T. Tran, ... Robert C. Robinson in Communications Biology
    Article Open access 31 August 2022
  17. Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom

    Ancestral sequence reconstruction is a fundamental aspect of molecular evolution studies and can trace small-scale sequence modifications through the...

    Matthieu Muffato, Alexandra Louis, ... Hugues Roest Crollius in Nature Ecology & Evolution
    Article Open access 16 January 2023
  18. Evolution: Mitochondrial Ribosomes Across Species

    The ribosome is among the most complex and ancient cellular macromolecular assemblies that plays a central role in protein biosynthesis in all living...
    Rajendra K. Agrawal, Soneya Majumdar in The Mitoribosome
    Protocol 2023
  19. Revisiting biocrystallization: purine crystalline inclusions are widespread in eukaryotes

    Despite the widespread occurrence of intracellular crystalline inclusions in unicellular eukaryotes, scant attention has been paid to their...

    Jana Pilátová, Tomáš Pánek, ... Peter Mojzeš in The ISME Journal
    Article 07 June 2022
  20. Genetics re-establish the utility of 2-methylhopanes as cyanobacterial biomarkers before 750 million years ago

    Fossilized lipids offer a rare glimpse into ancient ecosystems. 2-Methylhopanes in sedimentary rocks were once used to infer the importance of...

    Yosuke Hoshino, Benjamin J. Nettersheim, ... Eric A. Gaucher in Nature Ecology & Evolution
    Article Open access 26 October 2023
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