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  1. Proposal and extensive test of a calibration protocol for crop phenology models

    A major effect of environment on crops is through crop phenology, and therefore, the capacity to predict phenology for new environments is important....

    Daniel Wallach, Taru Palosuo, ... Sabine J. Seidel in Agronomy for Sustainable Development
    Article Open access 13 July 2023
  2. Incorporating physiological knowledge into correlative species distribution models minimizes bias introduced by the choice of calibration area

    Correlative species distribution models (SDMs) are important tools to estimate species’ geographic distribution across space and time, but their...

    Zhixin Zhang, **xin Zhou, ... Qiang Lin in Marine Life Science & Technology
    Article Open access 13 May 2024
  3. UAV-based canopy monitoring: calibration of a multispectral sensor for green area index and nitrogen uptake across several crops

    The fast and accurate provision of within-season data of green area index ( GAI ) and total N uptake ( total N ) is the basis for crop modeling and...

    Josephine Bukowiecki, Till Rose, ... Henning Kage in Precision Agriculture
    Article Open access 27 February 2024
  4. Combining accelerometry with allometry for estimating daily energy expenditure in joules when in-lab calibration is unavailable

    Background

    All behaviour requires energy, and measuring energy expenditure in standard units (joules) is key to linking behaviour to ecological...

    Pritish Chakravarty, Gabriele Cozzi, ... Kamiar Aminian in Movement Ecology
    Article Open access 30 May 2023
  5. Cross-Calibration of iDXA and pQCT Scanners at Rural and Urban Research Sites in The Gambia, West Africa

    Between-scanner differences in measures of bone and body composition can obscure or exaggerate physiological differences in multi-site studies or the...

    Mícheál Ó Breasail, Ramatoulie Janha, ... Kate A. Ward in Calcified Tissue International
    Article Open access 02 March 2023
  6. Reaction of KHP with excess NaOH or TRIS as standard reactions for calibration of titration calorimeters from 0 to 60 °C

    Calibration of titration calorimeters is an ongoing problem, particularly with calorimeters with reaction vessel volumes < 10 mL in which an...

    Jason D. Kenealey, Margarida Bastos, ... Lee D. Hansen in European Biophysics Journal
    Article Open access 13 April 2024
  7. Standards, Setup, Calibration, and Control Techniques

    Chapter 13 is dedicated to the standards used in setup, calibration, and performance control techniques. The first part of the chapter deals with the...
    Claudio Ortolani in Flow Cytometry Today
    Chapter 2022
  8. SCEPTRE improves calibration and sensitivity in single-cell CRISPR screen analysis

    Single-cell CRISPR screens are a promising biotechnology for map** regulatory elements to target genes at genome-wide scale. However, technical...

    Timothy Barry, Xuran Wang, ... Eugene Katsevich in Genome Biology
    Article Open access 20 December 2021
  9. MRMPro: a web-based tool to improve the speed of manual calibration for multiple reaction monitoring data analysis by mass spectrometry

    Background

    As a gold-standard quantitative technique based on mass spectrometry, multiple reaction monitoring (MRM) has been widely used in proteomics...

    Ruimin Wang, Hengxuan Jiang, ... Changbin Yu in BMC Bioinformatics
    Article Open access 06 February 2024
  10. GelMap: intrinsic calibration and deformation map** for expansion microscopy

    Expansion microscopy (ExM) is a powerful technique to overcome the diffraction limit of light microscopy by physically expanding biological specimen...

    Hugo G. J. Damstra, Josiah B. Passmore, ... Lukas C. Kapitein in Nature Methods
    Article Open access 18 September 2023
  11. Space-time multi-level modeling for zooplankton abundance employing double data fusion and calibration

    An important objective for marine biologists is to forecast the distribution and abundance of planktivorous marine predators. To do so, it is...

    Jorge Castillo-Mateo, Alan E. Gelfand, ... Robert S. Schick in Environmental and Ecological Statistics
    Article Open access 22 November 2023
  12. Systematic calibration of epitranscriptomic maps using a synthetic modification-free RNA library

    Recent years have witnessed rapid progress in the field of epitranscriptomics. Functional interpretation of the epitranscriptome relies on sequencing...

    Zhang Zhang, Tao Chen, ... Guan-Zheng Luo in Nature Methods
    Article 30 September 2021
  13. Determination of optimal tree height models and calibration designs for Araucaria araucana and Nothofagus pumilio in mixed stands affected to different levels by anthropogenic disturbance in South-Central Chile

    Key message

    Here, we present a workflow for determining the optimal tree height model and calibration design for forests affected to varying degrees...

    **nying Zhou, Erico Kutchartt, ... Martin Zwanzig in Annals of Forest Science
    Article Open access 21 April 2023
  14. Probability calibration-based prediction of recurrence rate in patients with diffuse large B-cell lymphoma

    Background

    Although many patients receive good prognoses with standard therapy, 30–50% of diffuse large B-cell lymphoma (DLBCL) cases may relapse...

    Shuanglong Fan, Zhiqiang Zhao, ... Yanhong Luo in BioData Mining
    Article Open access 13 August 2021
  15. Building a Calibration Set for Genomic Prediction , Characteristics to Be Considered, and Optimization Approaches

    The efficiency of genomic selection strongly depends on the prediction accuracy of the genetic merit of candidates. Numerous papers have shown that...
    Simon Rio, Alain Charcosset, ... Renaud Rincent in Genomic Prediction of Complex Traits
    Protocol Open access 2022
  16. Space–time calibration of wind speed forecasts from regional climate models

    Numerical weather predictions (NWPs) are systematically subject to errors due to the deterministic solutions used by numerical models to simulate the...

    Luiz E. S. Gomes, Thaís C. O. Fonseca, ... Ramiro Ruiz-Cárdenas in Environmental and Ecological Statistics
    Article 15 June 2021
  17. Calibration of food and feed crop models for sweet peppers with Bayesian optimization

    Crop models are tools used to analyze the interaction of crops and the environment. Since crop models can be applied to diverse research scales and...

    Taewon Moon, Sieun Sim, Jung Eek Son in Horticulture, Environment, and Biotechnology
    Article 17 January 2023
  18. Calibration and validation of predicted genomic breeding values in an advanced cycle maize population

    Key message

    Model training on data from all selection cycles yielded the highest prediction accuracy by attenuating specific effects of individual...

    Hans-Jürgen Auinger, Christina Lehermeier, ... Chris-Carolin Schön in Theoretical and Applied Genetics
    Article Open access 12 June 2021
  19. A Practical Guide for the Efficient Formulation and Calibration of Large, Energy- and Rule-Based Models of Cellular Signal Transduction

    Aberrant signal transduction leads to complex diseases such as cancer. To rationally design treatment strategies with small molecule inhibitors,...
    Protocol 2023
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