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  1. Enzymatic Reactions in Unusual Reaction Media

    The performance of enzymatic reactions in unusual reaction media offers a wide range of possibilities. Polar and nonpolar organic solvents,...
    Christoph Syldatk in Introduction to Enzyme Technology
    Chapter 2024
  2. Unusual serological profile in hepatitis B virus (HBV) infection associated with a probable clinical case of acute exacerbation of pre-existing chronic HBV infection

    Background

    Acute or chronic HBV infection in an individual can be laboratory characterized according to the serological profile of the viral markers...

    Robério Amorim de Almeida Pondé in Molecular Biology Reports
    Article 16 June 2023
  3. Unusual Evolution of Cephalopod Tryptophan Indole-Lyases

    Tryptophan indole-lyase (TIL), a pyridoxal-5-phosphate-dependent enzyme, catalyzes the hydrolysis of l -tryptophan ( l -Trp) to indole and ammonium...

    Hajime Julie Yuasa in Journal of Molecular Evolution
    Article 26 November 2023
  4. A tool to act blind? Object-assisted eye-covering as a self-handicap** behavior and social play signal in Balinese long-tailed macaques

    Self-handicap** behaviors evolved as honest signals that reliably reflect the quality of their performers. In playful activities, self-handicap**...

    Noëlle Gunst, Sergio M. Pellis, ... Jean-Baptiste Leca in Animal Cognition
    Article 28 October 2022
  5. Kinetic Methods of Deducing Binding Mechanisms Involving Intrinsically Disordered Proteins

    There are multiple examples of protein–protein interactions involving one intrinsically disordered protein region binding to an ordered protein...
    Elin Karlsson, Per Jemth in Protein-Ligand Interactions
    Protocol 2021
  6. Impact of explicit area scaling on kinetic models involving multiple compartments

    Background

    Computational modelling of cell biological processes is a frequently used technique to analyse the underlying mechanisms and to generally...

    Pascal Holzheu, Ruth Großeholz, Ursula Kummer in BMC Bioinformatics
    Article Open access 11 January 2021
  7. Camphor nitroimine: a key building block in unusual transformations and its applications in the synthesis of bioactive compounds

    The development of new drugs requires a lot of time and high financial investments. It involves a research network in which there is the...

    Emerson Teixeira da Silva, Luciano da Silva Santos, ... Marcus Vinícius Nora de Souza in Molecular Diversity
    Article 04 January 2022
  8. XPD stalled on cross-linked DNA provides insight into damage verification

    The superfamily 2 helicase XPD is a central component of the general transcription factor II H (TFIIH), which is essential for transcription and...

    Jochen Kuper, Tamsanqa Hove, ... Caroline Kisker in Nature Structural & Molecular Biology
    Article Open access 28 May 2024
  9. A pH-dependent shift of redox cofactor specificity in a benzyl alcohol dehydrogenase of aromatoleum aromaticum EbN1

    Abstract

    We characterise a reversible bacterial zinc-containing benzyl alcohol dehydrogenase (BaDH) accepting either NAD + or NADP + as a redox...

    Yvonne Gemmecker, Agnieszka Winiarska, ... Johann Heider in Applied Microbiology and Biotechnology
    Article Open access 08 July 2024
  10. Sequential Amplification of Amino Acid Enantiomeric Excess by Conglomerate and Racemic Compound: Plausible Prebiotic Route Towards Homochirality

    Some amino acids can crystallize from aqueous solution both as conglomerates and racemic compounds: under high supersaturation following rapid...

    Article 13 October 2023
  11. Low phosphatase activity of LiaS and strong LiaR-DNA affinity explain the unusual LiaS to LiaR in vivo stoichiometry

    Background

    LiaRS mediates Bacillus subtilis response to cell envelope perturbations. A third protein, LiaF, has an inhibitory role over LiaRS in the...

    Shailee Jani, Karen Sterzenbach, ... Dasantila Golemi-Kotra in BMC Microbiology
    Article Open access 29 April 2020
  12. Soaring over open waters: horizontal winds provide lift to soaring migrants in weak thermal conditions

    Background

    For soaring birds, the ability to benefit from variable airflow dynamics is crucial, especially while crossing natural barriers such as...

    J. Škrábal, Š. Krejčí, ... I. Literák in Movement Ecology
    Article Open access 09 December 2023
  13. Automatic Assembly and Calibration of Models of Enzymatic Reactions Based on Ordinary Differential Equations

    Enzymatic reactions have been studied for more than a 100 years. Indeed, isolation of enzymes from biological materials is no longer the main source...
    Jure Stojan, Milan Hodošček, Dušanka Janežič in Computational Methods for Estimating the Kinetic Parameters of Biological Systems
    Protocol 2022
  14. Interrogating the configurational stability of atropisomers

    Atropisomers are molecules whose stereogenicity arises from restricted rotation about a single bond. They are of current importance because of their...

    Jean-Paul Heeb, Jonathan Clayden, ... Roly J. Armstrong in Nature Protocols
    Article 04 August 2023
  15. New insights into the molecular mechanism of rhodopsin retinitis pigmentosa from the biochemical and functional characterization of G90V, Y102H and I307N mutations

    Mutations in the photoreceptor protein rhodopsin are known as one of the leading causes of retinal degeneration in humans. Two rhodopsin mutations,...

    María Guadalupe Herrera-Hernández, Neda Razzaghi, ... Pere Garriga in Cellular and Molecular Life Sciences
    Article Open access 07 January 2022
  16. Context-dependent DNA polymerization effects can masquerade as DNA modification signals

    Background

    Single molecule measurements of DNA polymerization kinetics provide a sensitive means to detect both secondary structures in DNA and...

    Yusuke Takahashi, Massa Shoura, ... Shinichi Morishita in BMC Genomics
    Article Open access 31 March 2022
  17. A bacterial cold-active dye-decolorizing peroxidase from an Antarctic Pseudomonas strain

    Abstract

    DyP (dye-decolorizing peroxidase) enzymes are hemeproteins that catalyze the H 2 O 2 -dependent oxidation of various molecules and also carry...

    Célica Cagide, Juan José Marizcurrena, ... Susana Castro-Sowinski in Applied Microbiology and Biotechnology
    Article 11 February 2023
  18. Ordered Motions in the Nitric-Oxide Dioxygenase Mechanism of Flavohemoglobin and Assorted Globins with Tightly Coupled Reductases

    Nitric-oxide dioxygenases (NODs) activate and combine O2 with NO to form nitrate. A variety of oxygen-binding hemoglobins with associated partner...
    Paul R. Gardner in Protein Reviews
    Chapter 2022
  19. Topological links in predicted protein complex structures reveal limitations of AlphaFold

    AlphaFold is making great progress in protein structure prediction, not only for single-chain proteins but also for multi-chain protein complexes....

    Yingnan Hou, Tengyu **e, ... **g Huang in Communications Biology
    Article Open access 28 October 2023
  20. Structure and function of an atypical homodimeric actin cap** protein from the malaria parasite

    Apicomplexan parasites, such as Plasmodium spp., rely on an unusual actomyosin motor, termed glideosome, for motility and host cell invasion. The...

    Ábris Ádám Bendes, Petri Kursula, Inari Kursula in Cellular and Molecular Life Sciences
    Article Open access 08 February 2022
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