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Development of unigene-derived SSR markers from RNA-seq data of Uraria lagopodioides (Fabaceae) and their application in the genus Uraria Desv. (Fabaceae)
BackgroundUraria Desv. belongs to the tribe Desmodieae (Fabaceae), a group of legume plants, some of which have medicinal properties. However, due...
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Construction of a high-density linkage map and graphical representation of the arrangement of transcriptome-based unigene markers on the chromosomes of onion, Allium cepa L.
BackgroundGenomic information for Allium cepa L. is limited as it is heterozygous and its genome is very large. To elucidate potential SNP markers...
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Polymorphic Microsatellite Markers to Study Sugar Beet’s (Beta vulgaris L.) Genetic Diversity
AbstractThe aim of the investigations is to reveal polymorphic microsatellite markers in order to study genetical diversity of sugar beet. Seedlings...
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Comparative Analysis of Transcriptome at Different Growth and Development Stages of Camellia oleifera
AbstractTo investigate the gene expression and metabolic pathways involved in flower development at different growth stages of Camellia oleifera ,...
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Transcriptome characteristics and MADS-box family transcription factors analysis of Acer griseum flowers
Acer griseum (Franch.) Pax bearing male and female (pseudo-hermaphroditic) flowers on the same individual is a well-known ornamental and endangered...
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Comparative transcriptome analyses of three Gentiana species provides signals for the molecular footprints of selection effects and the phylogenetic relationships
Species in Gentiana section Cruciata are important alpine plants with a center of diversity and speciation in Qinghai–Tibet Plateau (QTP), and some...
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Transcriptomic divergence of the Rheum palmatum complex derived from top-geoherb and non-geoherb areas provides the insights into geoherbalism properties of rhubarb
Geoherb usually represents high-quality medicinal herbs with better clinical therapeutic effects, and elucidating the geoherbalism is essential for...
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Screening and expression analysis of genes related to skin coloration in pearlscale angelfish (Centropyge vrolikii)
The skin coloration is one of the key characteristics of fish morphological diversity; understanding the molecular regulation mechanism of fish skin...
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Transcriptome analysis of the endangered dung beetle Copris tripartitus (Coleoptera: Scarabaeidae) and characterization of genes associated to immunity, growth, and reproduction
BackgroundDung beetles recycle organic matter through the decomposition of feces and support ecological balance. However, these insects are...
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Influence of UV Radiation on the Safety of Sugar Beet Mother Roots and the Genetic Variability of the Obtained Seeds
AbstractThe aim of the study was to investigate the influence of UV radiation on the safety of sugar beet mother roots and the genetical variability...
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Transcriptome analysis of resistant and susceptible mulberry responses to Meloidogyne enterolobii infection
BackgroundMulberry ( Morus alba L.) is an important sericulture crop; however, root-knot nematode infection seriously limits its production....
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Differentiation of Sugar Beet Varieties Using SSR Markers: A Tool to Create Promising Hybrids
AbstractThe goal of this study was a molecular genetic passportization of the initial breeding material of sugar beet (male sterile lines, synanthous...
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Association map** for abiotic stress tolerance using heat- and drought-related syntenic markers in okra
BackgroundConsiderable production losses are caused by heat and drought stress in okra. Germplasm evaluation at genetic level is essential for the...
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Single nucleotide polymorphism discovery and functional annotation analysis of blackberry fruit
Key messageWe analyzed the blackberry SNP-unigene functions and pathways and mined specific SNP loci related to flavonoid and anthocyanin synthesis...
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MYB4 is the best candidate transcription factor involved in pinosylvin stilbene biosynthesis in Pinus strobus L. cells by fungal elicitor treatment
Key messageDihydropinosylvin monomethyl ether (DPME) and pinosylvin monomethyl ether (PME) are pinosylvin derivatives that show high nematicidal...
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Transcriptomic and physiological analysis of atractylodes chinensis in response to drought stress reveals the putative genes related to sesquiterpenoid biosynthesis
BackgroundAtractylodes chinensis (DC) Koidz., a dicotyledonous and hypogeal germination species, is an important medicinal plant because its rhizome...
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Breeding Proso Millet (Panicum miliaceum L.) for Abiotic Stress Resistance
Proso millet (Panicum miliaceum L.) is an annual cereal crop known for its historical significance. This millet is decent provenance of energy,...
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Investigating mechanisms associated with emamectin benzoate resistance in the tomato borer Tuta absoluta
The tomato borer Tuta absoluta is a major pest of tomato mainly controlled by chemical insecticides. However, development of resistance to specific...
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De novo transcriptome sequencing and anthocyanin metabolite analysis reveals leaf color of Acer pseudosieboldianum in autumn
BackgroundLeaf color is an important ornamental trait of colored-leaf plants. The change of leaf color is closely related to the synthesis and...
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Comparison of differential expression genes in ovaries and testes of Pearlscale angelfish Centropyge vrolikii based on RNA-Seq analysis
Pearlscale angelfish Centropyge vrolikii is a kind of protogynous hermaphrodite fish with a natural sexual reversion. Under appropriate social...
