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  1. Time of sample collection is critical for the replicability of microbiome analyses

    As the microbiome field moves from descriptive and associative research to mechanistic and interventional studies, being able to account for all...

    Celeste Allaband, Amulya Lingaraju, ... Amir Zarrinpar in Nature Metabolism
    Article 01 July 2024
  2. Multi-trait diverse germplasm sources from mini-core collection for barley drought tolerance

    The core collection is a set of selected samples representing the genetic diversity in the base collection. This strategy has been proposed to...

    Zahra Saremi, Mehrshad Zeinalabdini, ... Behzad Sadeghzadeh in Cereal Research Communications
    Article 26 July 2023
  3. Preserving genetic diversity in Pinus tabuliformis breeding population through core collection development

    The conservation of genetic diversity is a crucial aspect of forest tree breeding programs, necessitating strategies for its safeguard. Here, the...

    Boning Yang, Huili Wang, ... Wei Li in Tree Genetics & Genomes
    Article 28 November 2023
  4. A multi-kingdom collection of 33,804 reference genomes for the human vaginal microbiome

    The human vagina harbours diverse microorganisms—bacteria, viruses and fungi—with profound implications for women’s health. Genome-level analysis of...

    Liansha Huang, Ruochun Guo, ... Wen Sun in Nature Microbiology
    Article Open access 21 June 2024
  5. Smart Wearables Data Collection and Analysis for Medical Applications: A Preliminary Approach for Functional Reach Test

    The Functional Reach Test (FRT) is a commonly used clinical tool to evaluate the dynamic balance and fall risk in older adults and individuals with...
    João Duarte, Luís Francisco, ... Paulo Jorge Coelho in Bioinformatics and Biomedical Engineering
    Conference paper 2023
  6. Characterization of a Bacterial Culture Collection from Terrestrial Subsurface Habitats in Colombia

    Microorganisms in terrestrial subsurface habitats have important roles in rock and mineral transformation and biogeochemical cycles processes. A...

    Jorge Luis Fuentes Lorenzo, Jhon Alexander Suescun-Sepulveda, ... Kevin Mauricio Cárdenas León in Proceedings of the National Academy of Sciences, India Section B: Biological Sciences
    Article 06 June 2023
  7. Genomic benchmarks: a collection of datasets for genomic sequence classification

    Background

    Recently, deep neural networks have been successfully applied in many biological fields. In 2020, a deep learning model AlphaFold won the...

    Katarína Grešová, Vlastimil Martinek, ... Panagiotis Alexiou in BMC Genomic Data
    Article Open access 01 May 2023
  8. Miniature three-photon microscopy maximized for scattered fluorescence collection

    In deep-tissue multiphoton microscopy, diffusion and scattering of fluorescent photons, rather than ballistic emanation from the focal point, have...

    Chunzhu Zhao, Shiyuan Chen, ... He** Cheng in Nature Methods
    Article 23 February 2023
  9. The impact of urine collection method on canine urinary microbiota detection: a cross-sectional study

    Background

    The urinary tract harbors unique microbial communities that play important roles in urogenital health and disease. Dogs naturally suffer...

    Emily L. Coffey, Andres M. Gomez, ... Eva Furrow in BMC Microbiology
    Article Open access 13 April 2023
  10. Drinking on the wing: water collection in polarotactic horseflies

    Many insects detect water bodies by observing the linearly polarised light which is reflected from the water surface. Polarotactic horseflies exhibit...

    Uroš Cerkvenik, Gregor Belušič in Journal of Comparative Physiology A
    Article Open access 21 July 2023
  11. The NPGS Sudanese sorghum core collection encloses novel grain mold resistant germplasm

    Grain mold is one of the most devasting diseases in sorghum [ Sorghum bicolor L. (Moench)] that affects the endosperm and deteriorates the pericarp...

    Hugo E. Cuevas, Louis K. Prom in Genetic Resources and Crop Evolution
    Article Open access 14 June 2024
  12. Towards standardising the collection of game statistics in Europe: a case study

    In order to monitor wildlife populations in a manner that supports policy makers and natural resource managers, data must be collected using...

    Carmen Ruiz-Rodríguez, José A. Blanco-Aguiar, ... Joaquín Vicente in European Journal of Wildlife Research
    Article Open access 29 November 2023
  13. Collection and characterization of cassava germplasm in Comoros

    In Comoros, cassava plays a major food security role, however yields are low as few modern cultivars are grown. Prior to the introduction of new...

    M. E. Ferguson, P. Ntawuruhunga, ... T. M. Shah in Genetic Resources and Crop Evolution
    Article Open access 15 June 2023
  14. Optimizing soil core fine root collection and characterization: significant time reduction with a sub-sampling approach

    Background and aims

    The quantification of plant roots from soil represents a pivotal step in many studies in plant ecology and soil science. However,...

    Raimondo Pardi, Maria Letizia Gargano, ... Mattia Terzaghi in Plant and Soil
    Article Open access 25 June 2024
  15. Molecular Verification of Trichophyton in the Brazilian URM Culture Collection

    Trichophyton species cause dermatophytosis in humans, with a high, worldwide frequency of reports and important public health relevance. We evaluated...

    Tatiana F. Oliveira, Carlos A. T. Valeriano, ... Oliane M. C. Magalhães in Mycopathologia
    Article 13 January 2024
  16. Genetic diversity, population structure and a core collection establishment of Pinus yunnanensis using microsatellite markers

    Pinus yunnanensis Franch. is an economically and ecologically important pine endemic to southwest China. A large number of low-quality and...

    Yingchun Miao, Chengjie Gao, ... Kai Cui in European Journal of Forest Research
    Article 08 August 2023
  17. Development of a Core Collection for Tetraclinis articulata Using ISSR Markers and Maximization Strategy

    Abstract

    Tetraclinis articulata (Vahl) Masters (Cupressaceae) is a woody tree species indigenous to North Africa. It is also found occasionally in...

    Makkaoui Meryem, Abbas Younes, ... Filali-Maltouf Abdelkarim in Plant Molecular Biology Reporter
    Article 14 March 2023
  18. Diversity, genetic structure and core collection of mangaba (Hancornia speciosa) genebank

    This work was developed with the objective of characterizing the variability and genetic structure of matrices and progenies of the Mangaba genebank...

    Ana Veruska Cruz da Silva, Itamara Bomfim Gois, ... Ana da Silva Lédo in Genetic Resources and Crop Evolution
    Article 05 July 2023
  19. Comparing three collection methods for pollinating insects within electric transmission rights-of-ways

    Abstract

    Various methods exist for collecting pollinating insects; however, colored bowl traps, vane traps, and sweep netting are among the most...

    Joshua W. Campbell, Anthony Abbate, ... Geoffrey R. Williams in Journal of Insect Conservation
    Article 30 January 2023
  20. Overview: Collection of Fungal Resources

    Since taking records of information on each specimen is time-consuming, it is advisable not to collect too many specimens at once to ensure that all...
    Yu Li, Taihui Li, ... Yucheng Dai in Atlas of Chinese Macrofungal Resources
    Chapter 2024
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