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  1. TargetRNA3: predicting prokaryotic RNA regulatory targets with machine learning

    Small regulatory RNAs pervade prokaryotes, with the best-studied family of these non-coding genes corresponding to trans -acting regulators that bind...

    Brian Tjaden in Genome Biology
    Article Open access 01 December 2023
  2. Priority index for critical Covid-19 identifies clinically actionable targets and drugs

    While genome-wide studies have identified genomic loci in hosts associated with life-threatening Covid-19 (critical Covid-19), the challenge of...

    Zhiqiang Zhang, Shan Wang, ... Hai Fang in Communications Biology
    Article Open access 16 February 2024
  3. Genome Scale Modeling for Novel Drug Targets

    System-level metabolic research can make use of computational simulations of genome-scale modeling (GSM), this depict the relationships between genes...
    Hara Prasad Mishra, Indrajeet Singh, Ajay Kumar in Advances in Bioinformatics
    Chapter 2024
  4. Molecular targets of histone deacetylase inhibitors in neurodegeneration and neuroprotection

    Background

    Neurodegenerative diseases show various phenotypes of molecular and cellular malfunction including mitochondrial dysfunction and...

    Yeongwon Park, Shangfei Yu, ... Hyemyung Seo in Molecular & Cellular Toxicology
    Article 17 April 2024
  5. Detection of Specific RNA Targets by Multimerization

    Abstract

    Detection of specific RNA targets via amplification-mediated techniques is widely used in fundamental studies and medicine due to essential...

    Assol R. Sakhabutdinova, Alexey V. Chemeris, Ravil R. Garafutdinov in Biochemistry (Moscow)
    Article 18 May 2023
  6. FMRP-mediated spatial regulation of physiologic NMD targets in neuronal cells

    In non-polarized cells, nonsense-mediated mRNA decay (NMD) generally begins during the translation of newly synthesized mRNAs after the mRNAs are...

    Tatsuaki Kurosaki, Xavier Rambout, Lynne E. Maquat in Genome Biology
    Article Open access 23 January 2024
  7. Filamentous Bacteria as Targets to Study Phagocytosis

    Filamentous targets are internalized via phagocytic cups that last for several minutes before closing to form a phagosome. This characteristic offers...
    Akriti Prashar, Maria Cecilia Gimenez, ... Mauricio R. Terebiznik in Phagocytosis and Phagosomes
    Protocol 2023
  8. Thermal proteome profiling unveils protein targets of deoxycholic acid in living neuronal cells

    Bile acids, synthesized in the liver and modified by the gut microbiota, play vital roles in various physiological processes. The dysregulation of...

    Hemi Luan, Xuan Li, ... Tiangang Luan in Advanced Biotechnology
    Article Open access 12 December 2023
  9. National commitments to Aichi Targets and their implications for monitoring the Kunming-Montreal Global Biodiversity Framework

    The Convention on Biological Biodiversity (CBD) exists as a major multilateral environmental agreement to safeguard biodiversity and “live in harmony...

    Calum Maney, Daniela Guaras, ... William Sutherland in npj Biodiversity
    Article Open access 03 April 2024
  10. Identification of lipid-modifying drug targets for autoimmune diseases: insights from drug target mendelian randomization

    Backgrounds

    A growing body of evidence has highlighted the interactions of lipids metabolism and immune regulation. Nevertheless, there is still a...

    **ao Hu, Peng Zhang, ... Peng Wang in Lipids in Health and Disease
    Article Open access 22 June 2024
  11. Logic programming-based Minimal Cut Sets reveal consortium-level therapeutic targets for chronic wound infections

    Minimal Cut Sets (MCSs) identify sets of reactions which, when removed from a metabolic network, disable certain cellular functions. The traditional...

    Maxime Mahout, Ross P. Carlson, ... Sabine Peres in npj Systems Biology and Applications
    Article Open access 02 April 2024
  12. Exploiting epigenetic targets to overcome taxane resistance in prostate cancer

    The development of taxane resistance remains a major challenge for castration resistant prostate cancer (CR-PCa), despite the effectiveness of...

    Buse Cevatemre, Ipek Bulut, ... Ceyda Acilan in Cell Death & Disease
    Article Open access 12 February 2024
  13. Computational drug development for membrane protein targets

    The application of computational biology in drug development for membrane protein targets has experienced a boost from recent developments in deep...

    Haijian Li, **aolin Sun, ... Horst Vogel in Nature Biotechnology
    Article 15 February 2024
  14. Long non-coding RNAs in cancer: multifaceted roles and potential targets for immunotherapy

    Cancer remains a major global health concern with high mortality rates mainly due to late diagnosis and poor prognosis. Long non-coding RNAs...

    Lokesh K. Kadian, Deepika Verma, ... Shyam S. Chauhan in Molecular and Cellular Biochemistry
    Article 28 February 2024
  15. Molecular targets and therapeutic strategies for triple-negative breast cancer

    Triple-negative breast cancer (TNBC) is known for its heterogeneous complexity and is often difficult to treat. TNBC lacks the expression of major...

    Yashasvi Bhat, M. R. Thrishna, Satarupa Banerjee in Molecular Biology Reports
    Article 04 November 2023
  16. Ferroptosis: opening up potential targets for gastric cancer treatment

    The fifth most frequent cancer in the world is gastric cancer. It ranks as the fourth most common reason for cancer-related deaths. Even though...

    Yuwei Li, Jiangrong Liu, ... Zhiwei Zhang in Molecular and Cellular Biochemistry
    Article 11 December 2023
  17. Systems Approach for Identifying Drug Targets by Computational Approaches

    Large datasets are frequently gathered, stored and analysed in the big data age with the goal of guiding biological discoveries and validating...
    Chapter 2024
  18. Systems Approaches in Identifying Disease-Related Genes and Drug Targets

    Target discovery is the first crucial stage in the target drug identification and discovery pipeline. For a better understanding of the underlying...
    Chapter 2024
  19. Correlations between genetically predicted lipid-lowering drug targets and inflammatory bowel disease

    Background

    Millions of individuals globally suffer from Inflammatory bowel diseases (IBDs). There is a dearth of large population-based investigations...

    Kuiyuan Huang, Shenan Huang, Ming **ong in Lipids in Health and Disease
    Article Open access 29 January 2024
  20. Insight into telomere regulation: road to discovery and intervention in plasma drug-protein targets

    Background

    Telomere length is a critical metric linked to aging, health, and disease. Currently, the exploration of target proteins related to...

    Kaixi Ding, Juejue Zhangwang, ... Chun** **ong in BMC Genomics
    Article Open access 02 March 2024
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