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From stationary to directional transition: a case study in Doñana
ContextDoñana’s landscape is a mosaic of different types of transitions at different spatial and temporal scales. Among them, stationary transitions...
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Active layer dynamics drives a transition to biofilm fingering
The emergence of spatial organisation in biofilm growth is one of the most fundamental topics in biofilm biophysics and microbiology. It has long...
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Spatial transition tensor of single cells
Spatial transcriptomics and messenger RNA splicing encode extensive spatiotemporal information for cell states and transitions. The current...
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The metal cofactor: stationary or mobile?
AbstractMetal cofactors are essential for catalysis and enable countless conversions in nature. Interestingly, the metal cofactor is not always...
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Transition Models Applied to Interactions Involving Agricultural Pests
In Biological Sciences and particularly in Entomology, studies on the behavior of insects in the environment in which they live, in their...
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Epithelial-mesenchymal Transition (EMT) and the Effect of Atorvastatin on it in ARPE-19 cells
Proliferative vitreoretinopathy (PVR) develops after an unsuccessful or complicated recovery from rhegmatogenous retinal detachment (RRD) surgery....
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Roles of ApcD and orange carotenoid protein in photoinduction of electron transport upon dark–light transition in the Synechocystis PCC 6803 mutant deficient in flavodiiron protein Flv1
Flavodiiron proteins Flv1/Flv3 accept electrons from photosystem (PS) I. In this work we investigated light adaptation mechanisms of Flv1-deficient...
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sciCSR infers B cell state transition and predicts class-switch recombination dynamics using single-cell transcriptomic data
Class-switch recombination (CSR) is an integral part of B cell maturation. Here we present sciCSR (pronounced ‘scissor’, single-cell inference of...
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Enzyme expression kinetics by Escherichia coli during transition from rich to minimal media depends on proteome reserves
Bacterial fitness depends on adaptability to changing environments. In rich growth medium, which is replete with amino acids, Escherichia coli ...
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Translocating proteins compartment-specifically alter the fate of epithelial-mesenchymal transition in a compartmentalized Boolean network model
Regulation of translocating proteins is crucial in defining cellular behaviour. Epithelial-mesenchymal transition (EMT) is important in cellular...
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Membrane recruitment of Atg8 by Hfl1 facilitates turnover of vacuolar membrane proteins in yeast cells approaching stationary phase
BackgroundThe vacuole/lysosome is the final destination of autophagic pathways, but can also itself be degraded in whole or in part by selective...
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An ancient divide in outer membrane tethering systems in bacteria suggests a mechanism for the diderm-to-monoderm transition
Recent data support the hypothesis that Gram-positive bacteria (monoderms) arose from Gram-negative ones (diderms) through loss of the outer membrane...
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Classification in Non-stationary Environments Using Coresets over Sliding Windows
In non-stationary environments, several constraints require algorithms to be fast, memory-efficient, and highly adaptable. While there are several...
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Increasing Winter Temperatures Stimulate Scots Pine Growth in the North German Lowlands Despite Stationary Sensitivity to Summer Drought
More than half of the forest area of the North German Lowlands is stocked with Scots pine-dominated forests, mostly plantations. Climate change...
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The Physiological Adaptation Features of the Poly-Extremophilic Yeast Yarrowia lipolytica W29 During Long-Term Cultivation
AbstractThe study of the redox and mitochondria state, as well as some other hallmarks of cell aging of extremophilic yeast Yarrowia lipolytica W29,...
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Understanding the transition to viable but non-culturable state in Escherichia coli W3110: a comprehensive analysis of potential spectrochemical biomarkers
The viable but non-culturable (VBNC) state is considered a survival strategy employed by bacteria to endure stressful conditions, allowing them to...
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Fish yawn: the state-change hypothesis in juvenile white-spotted char Salvelinus leucomaenis
Yawning is a ubiquitous stereotyped action in vertebrates. Yawning may induce behavioral state changes in animals through its arousal function, but...
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The Ocean Transition: What to Learn from System Transitions
The ocean is the ultimate commons. Sustainability narratives now recognise what science continues to demonstrate—that ecosystems on land, rivers,...
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Future Transitions to a Renewable Stationary Energy Sector: Implications of the Future Ecological Footprint and Land Use
We investigate the development of stationary energy policy for the national and sub-national ecological footprint. Three carbon emission mitigation...
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Human Parathyroid Hormone Analog (3–34/29–34) promotes wound re-epithelialization through inducing keratinocyte migration and epithelial–mesenchymal transition via PTHR1-PI3K/AKT activation
BackgroundRe-epithelialization is important in the process of wound healing. Various methods have been identified to expedite the process, but their...
