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  1. Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known Alphaproteobacteria

    Determining the phylogenetic origin of mitochondria is key to understanding the ancestral mitochondrial symbiosis and its role in eukaryogenesis....

    Sergio A. Muñoz-Gómez, Edward Susko, ... Andrew J. Roger in Nature Ecology & Evolution
    Article 13 January 2022
  2. Identifying priorities under highly heterogeneous environments through species distribution models to facilitate orchid conservation

    The ecological suitability prediction and analysis of specific taxonomic groups at finer geographic scales provide vital references for identifying...

    Xue-Man Wang, Ying Tang, ... Pei-Hao Peng in Biodiversity and Conservation
    Article 12 January 2024
  3. Can machine learning models provide accurate fertilizer recommendations?

    Accurate modeling of site-specific crop yield response is key to providing farmers with accurate site-specific economically optimal input rates...

    Takashi S. T. Tanaka, Gerard B. M. Heuvelink, ... David S. Bullock in Precision Agriculture
    Article Open access 25 March 2024
  4. Occupancy models with autocorrelated detection heterogeneity

    Occupancy models are commonly used in statistical ecology to model binary detection/non-detection data. These hierarchical models make a distinction...

    Staci Hepler, Biqing Yang in Environmental and Ecological Statistics
    Article 09 June 2024
  5. Improving the study of plant evolution with multi-matrix mixture models

    Amino acid substitution model is a key component to study the plant evolution from protein sequences. Although single-matrix amino acid substitution...

    Nguyen Huy Tinh, Le Sy Vinh in Plant Systematics and Evolution
    Article 12 April 2024
  6. OBSERVE: guidelines for the refinement of rodent cancer models

    Existing guidelines on the preparation (Planning Research and Experimental Procedures on Animals: Recommendations for Excellence (PREPARE)) and...

    Stéphanie I. De Vleeschauwer, Marieke van de Ven, ... Els R. Hermans in Nature Protocols
    Article 11 July 2024
  7. Extra-Skeletal Manifestations in Osteogenesis Imperfecta Mouse Models

    Osteogenesis imperfecta (OI) is a rare heritable connective tissue disorder of skeletal fragility with an incidence of roughly 1:15,000....

    Tara K. Crawford, Brittany N. Lafaver, Charlotte L. Phillips in Calcified Tissue International
    Article 19 April 2024
  8. Experimental Zebrafish Models of Mitochondrial Dysfunction in the Pathogenesis of CNS Diseases

    Abstract

    Mitochondrial dysfunctions are associated with pathogenesis of various brain disorders, including Alzheimer’s, Parkinson’s and Huntington’s...

    L. V. Yushko, M. M. Kotova, ... A. V. Kalueff in Journal of Evolutionary Biochemistry and Physiology
    Article 01 November 2023
  9. Translational Utility of Organoid Models for Biomedical Research on Gastrointestinal Diseases

    Abstract

    Organoid models have recently been utilized to study 3D human-derived tissue systems to uncover tissue architecture and adult stem...

    Pratibha Banerjee, Sabyasachi Senapati in Stem Cell Reviews and Reports
    Article 17 May 2024
  10. Within-Host Mathematical Models of Antibiotic Resistance

    Mathematical models have been used to study the spread of infectious diseases from person to person. More recently studies are develo** within-host...
    Aminat Yetunde Saula, Gwenan Knight, Ruth Bowness in Antibiotic Resistance Protocols
    Protocol 2024
  11. An Update on Animal Models of Osteogenesis Imperfecta

    Osteogenesis imperfecta (OI) is a heterogeneous disorder characterized by bone fragility, multiple fractures, bone deformity, and short stature. In...

    Fang Lv, **aoling Cai, Linong Ji in Calcified Tissue International
    Article 29 June 2022
  12. Models to estimate genetic gain of soybean seed yield from annual multi-environment field trials

    Key message

    Simulations demonstrated that estimates of realized genetic gain from linear mixed models using regional trials are biased to some degree....

    Matheus D. Krause, Hans-Peter Piepho, ... William D. Beavis in Theoretical and Applied Genetics
    Article Open access 21 November 2023
  13. Non-classical animal models for studying adrenal diseases: advantages, limitations, and implications for research

    The study of adrenal disorders is a key component of scientific research, driven by the complex innervation, unique structure, and essential...

    Alina Bilyalova, Airat Bilyalov, ... Oleg Gusev in Laboratory Animal Research
    Article Open access 19 June 2024
  14. Application of linear mixed models for multiple harvest/site trial analyses in perennial plant breeding

    The optimization of perennial plant breeding necessarily involves the evaluation of multi-harvest and/or multi-site trials. In these situations,...

    Saulo F. S. Chaves, Jeniffer S. P. C. Evangelista, ... Leonardo L. Bhering in Tree Genetics & Genomes
    Article 01 December 2022
  15. Animal models to study the neurological manifestations of the post-COVID-19 condition

    More than 40% of individuals infected by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) have experienced persistent or relapsing...

    Carla Usai, Lourdes Mateu, ... Joaquim Segalés in Lab Animal
    Article Open access 24 August 2023
  16. From leaf to multiscale models of photosynthesis: applications and challenges for crop improvement

    To keep up with the growth of human population and to circumvent deleterious effects of global climate change, it is essential to enhance crop yield...

    Alexandrina Stirbet, Ya Guo, ... Govindjee Govindjee in Photosynthesis Research
    Article 15 April 2024
  17. Forecasting natural regeneration of sagebrush after wildfires using population models and spatial matching

    Context

    Addressing ecosystem degradation in the Anthropocene will require ecological restoration across large spatial extents. Identifying areas where...

    Andrii Zaiats, Megan E. Cattau, ... T. Trevor Caughlin in Landscape Ecology
    Article 17 March 2023
  18. Astrocytes: new evidence, new models, new roles

    Astrocytes have been in the limelight of active research for about 3 decades now. Over this period, ideas about their function and role in the...

    Alexey Brazhe, Andrey Verisokin, ... Dmitry Postnov in Biophysical Reviews
    Article 18 October 2023
  19. Large-landscape connectivity models for pond-dwelling species: methods and application to two invasive amphibians of global concern

    Context

    Functional connectivity models are essential in identifying major dispersal pathways and develo** effective management strategies for...

    Giovanni Vimercati, Dennis Rödder, ... Jean Secondi in Landscape Ecology
    Article Open access 18 March 2024
  20. Large language models generate functional protein sequences across diverse families

    Deep-learning language models have shown promise in various biotechnological applications, including protein design and engineering. Here we describe...

    Ali Madani, Ben Krause, ... Nikhil Naik in Nature Biotechnology
    Article 26 January 2023
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