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Genotypic and genetic diversity of Maâmora’s cork oak forest using simple sequence repeats (SSR) and inter simple sequence repeats (ISSR) markers for conservation
Maâmora is a cork oak forest in Morocco known for its production of sweet acorns. Genetic diversity and relationships were evaluated in 240...
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Genome-wide identification of simple sequence repeats and development of polymorphic SSR markers in brown trout (Salmo trutta)
In China, the brown trout is a second-level key aquatic wildlife protection animal in the Tibet Autonomous Region. In order to protect the brown...
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Genetic stability analysis of the temporary immersion bioreactors–derived sugarcane seedlings with simple sequence repeat (SSR) markers
The utilization of temporary immersion system-bioreactors (TIB) has shown promise for sugarcane micropropagation due to its capacity for high-yield...
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Genoty**-by-sequencing (GBS) reveals greater somatic mutations than simple sequence repeats (SSRs) in micropropagated cannabis plants
Micropropagation is widely used in horticulture to provide large numbers of genetically similar, disease-free plants. The intent is to produce...
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Pattern and variation in simple sequence repeat (SSR) at different genomic regions and its implications to maize evolution and breeding
BackgroundRepetitive DNA sequences accounts for over 80% of maize genome. Although simple sequence repeats (SSRs) account for only 0.03% of the...
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Genome-wide development of simple sequence repeats markers and genetic diversity analysis of chayote
BackgroundChayote is a high economic crop in the Cucurbitaceae family, playing an important role in food production, disease treatment and the...
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Genetic diversity and population structure analysis in wood-apple (Limonia acidissima L.) using simple sequence repeat (SSR) markers
Wood-apple ( Limonia acidissima L., Rutaceae) is an underutilized fruit tree species in the Indian subcontinent. The edible fruit and other parts of...
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Genome-wide characterization leading to simple sequence repeat (SSR) markers development in Shorea robusta
Tropical rainforests in Southeast Asia are enriched by multifarious biota dominated by Dipterocarpaceae. In this family, Shorea robusta is an...
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Analysis of genetic variability among bivoltine and multivoltine silkworm genotypes using inter simple sequence repeat and simple sequence repeat markers
The silkworm is an ideal lepidopteran model for the study of genetics and genetic diversity. In this study, inter-simple sequence repeats (ISSR) and...
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Exploring cross-species genetic diversity: unveiling new insights in Megalobrama through whole genome-wide simple sequence repeats
Relying solely on cross-species analysis of single nucleotide polymorphisms (SNPs) through single-species genome mining can introduce biases. To...
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Genetic diversity and population structure analysis of papaya (Carica papaya L.) germplasm using simple sequence repeat (SSR) markers
Papaya ( Carica papaya L.) is a versatile tropical fruit crop with economic and nutritional benefits. Assessing genetic diversity of the germplasm is...
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Distribution and conservation of simple sequence repeats in plant pathogenic species of Zymoseptoria and development of genomic resources for its orphaned species
To better understand the structure and evolution of the genomes of four plant pathogenic species of Zymoseptoria , we analyzed the occurrence,...
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Genome Wide Characterization and Analysis of Simple Sequence Repeats in Cultrinae Species
Simple sequence repeat markers also known as microsatellite markers have been used to answer several biological questions. Cultrinae is one of the...
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Molecular characterization of some currants (Ribes species) from Türkiye using inter-primer binding site (iPBS) and simple sequence repeat (SSR) markers
This study was carried out to determine the genetic relationships and variation levels among currant genotypes and cultivars in Türkiye. Ten currant...
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Assessment of genetic diversity among sago palms (Metroxylon sagu Rottb.) in Bengkulu, Indonesia using simple sequence repeats
Sago palm ( Metroxylon sagu Rottb.) is a carbohydrate-producing plant. It produces a starchy, edible pith or core within its trunk, which is the...
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Genetic diversity and population structure of Azadirachta indica using simple sequence repeat (SSR) markers for genetic resource conservation and utilization
Azadirachta indica (neem) is a multipurpose tree species that is distributed in Asian and African countries. It is used in food, medicine and...
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Population structure and genetic diversity of Moroccan cannabis (Cannabis sativa L.) germplasm through simple sequence repeat (SSR) analysis
Morocco has a long history of domesticating cannabis and refuges a local Beldia population, which lacks detailed information on genetic diversity. In...
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Unveiling the demographic background and genetic diversity of Urochloa mosambicensis (Poaceae) through genome-wide identification of simple sequence repeats and molecular marker development
The first set of simple sequence repeat (SSR) markers for Urochloa mosambicensis (Hack.) Dandy is described in this study. SSRs were isolated from a...
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Genetic diversity and differentiation of South African cactus pear cultivars (Opuntia spp.) based on simple sequence repeat (SSR) markers
Opuntia ficus-indica (L.) Mill. is one of the most recognisable agricultural crops that can withstand harsh environmental conditions. South Africa is...
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Deciphering genetic diversity and population structure in ex-situ conserved Brassica rapa var. yellow sarson germplasm using morphological traits and simple sequence repeat (SSR) markers
Brassica rapa (2n = 20, AA) is consumed as vegetable, fodder and oilseed crop. Oilseed type B. rapa species occupy important place after B. juncea in...
