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  1. Moderate protein intake percentage in mice for maintaining metabolic health during approach to old age

    Nutritional requirements for maintaining metabolic health may vary with each life stage, such as young, middle, and old age. To investigate the...

    Yoshitaka Kondo, Hitoshi Aoki, ... Akihito Ishigami in GeroScience
    Article Open access 28 April 2023
  2. Mining key circRNA-associated-ceRNA networks for milk fat metabolism in cows with varying milk fat percentages

    Background

    Cow milk fat is an essential indicator for evaluating and measuring milk quality and cow performance. Growing research has identified the...

    **aofang Feng, Lijia Tong, ... Yaling Gu in BMC Genomics
    Article Open access 01 April 2024
  3. Solvent-Induced Protein Precipitation for Drug Target Discovery

    Traditional chemical proteomics approaches for screening drug targets usually require the immobilization/modification of the drug molecules to pull...
    **aolei Zhang, Lianghai Hu, Mingliang Ye in Cell-Wide Identification of Metabolite-Protein Interactions
    Protocol 2023
  4. Selection of optimal quantile protein biomarkers based on cell-level immunohistochemistry data

    Background

    Protein biomarkers of cancer progression and response to therapy are increasingly important for improving personalized medicine. Advanced...

    Misung Yi, Tingting Zhan, ... Inna Chervoneva in BMC Bioinformatics
    Article Open access 22 July 2023
  5. Algal Protein: Future of Sustainable Food

    Due to factors including population growth, rising incomes, increased urbanization, and aging populations, the need for protein components is...
    Komal, Rohan Samir Kumar Sachan, ... Arun Karnwal in Food Microbial Sustainability
    Chapter 2023
  6. Peptide-Protein Interface Classification Using Convolutional Neural Networks

    Peptides are short chains of amino acid residues linked through peptide bonds, whose potential to act as protein inhibitors has contributed to the...
    Lucas Moraes dos Santos, Diego Mariano, ... Raquel Cardoso de Melo Minardi in Advances in Bioinformatics and Computational Biology
    Conference paper 2023
  7. Eri Silkworm Pupae: An Alternative Source of Protein in Changing Climate

    Climate change affects food security by creating a range of inconveniences including loss of crop productivity, reduction in the quality of crops,...
    Deepika Borah, Mrigendra Narayan Kumar, ... Nabanita Bhattacharyya in Food Production, Diversity, and Safety Under Climate Change
    Chapter 2024
  8. E6 Tagged Protein Production, Extraction, and Purification from Escherichia coli Lysate

    Cervical cancer has been extensively associated with human papillomavirus (HPV) due to the expression of oncoproteins such as E6. This protein can...
    Diana Gomes, Luís A. Passarinha, Ângela Sousa in Advanced Methods in Structural Biology
    Protocol 2023
  9. Early Sowing and Soil Scarification Improve Protein and Oil Contents in Soybean Grains Cultivated in Lowlands

    Soybean cultivation in lowlands has increased over the years. In this case, further studies on soybean composition based on management practices are...

    Lissara Polano Ody, Jéssica Streck Baisch, ... Giovani Leone Zabot in Journal of Soil Science and Plant Nutrition
    Article 03 January 2024
  10. Epigenetic regulation of functional candidate genes for milk production traits in dairy sheep subjected to protein restriction in the prepubertal stage

    Background

    As the prepubertal stage is a crucial point for the proper development of the mammary gland and milk production, this study aims to...

    P. A. S. Fonseca, A. Suárez-Vega, ... J. J. Arranz in BMC Genomics
    Article Open access 01 September 2023
  11. Molecular Dynamics Simulation to Study Protein Conformation and Ligand Interaction

    The field of molecular dynamics (MD) simulations has become indispensable today to studying the conformational flexibility and dynamics of proteins...
    Santanu Sasidharan, Vijayakumar Gosu, ... Prakash Saudagar in Protein Folding Dynamics and Stability
    Chapter 2023
  12. Optimization of a deep mutational scanning workflow to improve quantification of mutation effects on protein–protein interactions

    Deep Mutational Scanning (DMS) assays are powerful tools to study sequence-function relationships by measuring the effects of thousands of sequence...

    Alexandra M Bendel, Kristjana Skendo, ... Guillaume Diss in BMC Genomics
    Article Open access 24 June 2024
  13. Protein expression of nucleolar protein 12 in the retina and its implication in protection of retina from UV irradiation damage

    Nucleolar protein 12 (NOL12), one of the nucleolar proteins which are primarily expressed in the nucleolus and play key roles in RNA metabolism, cell...

    **gtao Liu, **aomei Tan, ... Ting Peng in Cell Death Discovery
    Article Open access 11 March 2024
  14. A monomeric StayGold fluorescent protein

    StayGold is an exceptionally bright and stable fluorescent protein that is highly resistant to photobleaching. Despite favorable fluorescence...

    Esther Ivorra-Molla, Dipayan Akhuli, ... Mohan K. Balasubramanian in Nature Biotechnology
    Article Open access 11 December 2023
  15. Improvement of plant resistance to geminiviruses via protein de-S-acylation

    Geminiviruses are an important group of viruses that infect a variety of plants and result in heavy agricultural losses worldwide. The homologs of C4...

    Yawen Zhao, Zhenggang Li, ... Jianbin Lai in Stress Biology
    Article Open access 25 April 2024
  16. Protein Distribution Analysis by a High-Precision Prediction System for Membrane Proteins

    To determine the proportion of membrane proteins in the whole genome, we developed a membrane protein prediction system, SOSUI. This system used only...
    Shigeki Mitaku, Ryusuke Sawada in Evolution Seen from the Phase Diagram of Life
    Chapter 2024
  17. Expressional vagaries of OsCAMTA genes under differential abiotic stresses supported with protein–protein interaction study and prediction of miRNA target sites

    In response to various stressors, the calmodulin-binding transcription activator (CAMTA) can regulate downstream genes involved in calcium (Ca 2+ )/calm...

    Hena Gain, Soumya De, Joydeep Banerjee in Plant Biotechnology Reports
    Article 30 March 2024
  18. Low Rank Approximation Methods for Identifying Impactful Pairwise Protein Mutations

    Assessing how an amino acid mutation impacts protein structure and stability provides insights that advance drug design efforts for combating a...
    Chris Daw, Brian Barragan Cruz, ... Brian Hutchinson in Algorithms and Methods in Structural Bioinformatics
    Chapter 2022
  19. Sepiolite as an effective supplement for low-protein diets with the constant energy-protein ratio in broilers

    The present study aimed to examine the influence of sepiolite on growth performance, meat quality, intestinal health, some blood parameters, and...

    Sakine Yalçın, Emre Sunay Gebeş, ... Ozan Ahlat in Tropical Animal Health and Production
    Article 08 June 2022
  20. Investigating Epidermal Growth Factor Receptor Trafficking with High-Resolution Enzymatic Protein-Tagging and Transmission Electron Microscopy

    Enzymatic ascorbate peroxidase (APEX) tagging allows for high-resolution, three-dimensional protein distribution analyses in cells and tissues. This...
    Nicholas Ariotti in Imaging Cell Signaling
    Protocol 2024
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