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Showing 1-20 of 1,707 results
  1. The Evolution of Cooperation in a Lattice-Structured Population Under Two Different Updating Rules

    The evolution of cooperation is studied in a lattice-structured habitat under two different updating rules: the score-dependent viability model...
    Chapter 2022
  2. Updating the Impact of Drought on Root Exudation: A Strigolactones Perspective

    With the changing global climate, drought is considered one of the most devastating abiotic factors. Drought not only limits plant productivity by...

    Nidhi Singh, Debasis Chattopadhyay, Santosh Kumar Gupta in Journal of Plant Growth Regulation
    Article 15 July 2023
  3. Dynamic model updating (DMU) approach for statistical learning model building with missing data

    Background

    Develo** statistical and machine learning methods on studies with missing information is a ubiquitous challenge in real-world biological...

    Rahi Jain, Wei Xu in BMC Bioinformatics
    Article Open access 29 April 2021
  4. Shine: A novel strategy to extract specific, sensitive and well-conserved biomarkers from massive microbial genomic datasets

    Background

    Concentrations of the pathogenic microorganisms’ DNA in biological samples are typically low. Therefore, DNA diagnostics of common...

    Cong Ji, Junbin Shao in BMC Bioinformatics
    Article Open access 04 April 2023
  5. Improving hybrid rice breeding programs via stochastic simulations: number of parents, number of hybrids, tester update, and genomic prediction of hybrid performance

    Key message

    Schemes that use genomic prediction outperform others, updating testers increases hybrid genetic gain, and larger population sizes tend to...

    Roberto Fritsche-Neto, Jauhar Ali, ... Marlee Rose Labroo in Theoretical and Applied Genetics
    Article Open access 12 December 2023
  6. A comparison of methods for training population optimization in genomic selection

    Key message

    Maximizing CDmean and Avg_GRM_self were the best criteria for training set optimization. A training set size of 50–55% (targeted) or...

    Javier Fernández-González, Deniz Akdemir, Julio Isidro y Sánchez in Theoretical and Applied Genetics
    Article Open access 09 March 2023
  7. Efficient marker-assisted breeding for clubroot resistance in elite Pol-CMS rapeseed varieties by updating the PbBa8.1 locus

    Clubroot disease poses a severe threat to rapeseed ( Brassica napus ) production worldwide and has recently been spreading across China at an...

    Yiming Guo, Bao Li, ... Tonghua Wang in Molecular Breeding
    Article 02 July 2022
  8. SEEI: spherical evolution with feedback mechanism for identifying epistatic interactions

    Background

    Detecting epistatic interactions (EIs) involves the exploration of associations among single nucleotide polymorphisms (SNPs) and complex...

    De-yu Tang, Yi-jun Mao, ... Junxi Zheng in BMC Genomics
    Article Open access 13 May 2024
  9. Temporal assortment of cooperators in the spatial prisoner’s dilemma

    We study a spatial, one-shot prisoner’s dilemma (PD) model in which selection operates on both an organism’s behavioral strategy (cooperate or...

    Tim Johnson, Oleg Smirnov in Communications Biology
    Article Open access 12 November 2021
  10. Reproductive strategy of the speckled guitarfish, Pseudobatos glaucostigmus (Elasmobranchii: Rhinobatidae), from the South-Eastern Gulf of California, Mexico

    We report the reproductive strategy of the speckled guitarfish, Pseudobatos glaucostigmus , a poorly studied elasmobranch caught in the south-eastern...

    Raúl E. Lara-Mendoza, J. Fernando Márquez-Farías in Environmental Biology of Fishes
    Article 29 October 2021
  11. A Reality Check of the Global TX2 Goals of Doubling the Bengal Tiger (Panthera tigris tigris) Population by 2022 in the Sundarbans Mangrove Forest

    Abstract

    Considered a unique biodiversity hotspot of the world, the Sundarbans mangrove harbours a wide variety of wild and plant species. This...

    Article 05 December 2023
  12. Genomic data integration and user-defined sample-set extraction for population variant analysis

    Background

    Population variant analysis is of great importance for gathering insights into the links between human genotype and phenotype. The 1000...

    Tommaso Alfonsi, Anna Bernasconi, ... Marco Masseroli in BMC Bioinformatics
    Article Open access 29 September 2022
  13. Landscape, Infrastructure, and Aesthetic Dimension: Methodological Strategy for a Medium-Sized Brazilian City

    This chapter presents a process of planning and design that has been developed for São Carlos, a medium-sized city in the state of São Paulo, Brazil....
    Chapter 2023
  14. Portability of genomic predictions trained on sparse factorial designs across two maize silage breeding cycles

    Key message

    We validated the efficiency of genomic predictions calibrated on sparse factorial training sets to predict the next generation of hybrids...

    Alizarine Lorenzi, Cyril Bauland, ... Laurence Moreau in Theoretical and Applied Genetics
    Article Open access 07 March 2024
  15. PPSNO: A Feature-Rich SNO Sites Predictor by Stacking Ensemble Strategy from Protein Sequence-Derived Information

    The protein S-nitrosylation (SNO) is a significant post-translational modification that affects the stability, activity, cellular localization, and...

    Lun Zhu, Liuyang Wang, ... Sen Yang in Interdisciplinary Sciences: Computational Life Sciences
    Article 11 January 2024
  16. A belief systems analysis of fraud beliefs following the 2020 US election

    Beliefs that the US 2020 Presidential election was fraudulent are prevalent despite substantial contradictory evidence. Why are such beliefs often...

    Rotem Botvinik-Nezer, Matt Jones, Tor D. Wager in Nature Human Behaviour
    Article 10 April 2023
  17. Guanaco Sustainable Management as a Conservation and Rural Development Strategy

    Desertification is the most important social, economic, and ecological problem in Patagonia. Several factors have contributed to the ecosystem...
    Pablo Carmanchahi, Gabriela Lichtenstein, ... Ramiro Ovejero in Guanacos and People in Patagonia
    Chapter 2022
  18. Evidence for a competitive relationship between executive functions and statistical learning

    The ability of the brain to extract patterns from the environment and predict future events, known as statistical learning, has been proposed to...

    Felipe Pedraza, Bence C. Farkas, ... Dezső Németh in npj Science of Learning
    Article Open access 12 April 2024
  19. Primary case inference in viral outbreaks through analysis of intra-host variant population

    Background

    Investigation of outbreaks to identify the primary case is crucial for the interruption and prevention of transmission of infectious...

    J. Walker Gussler, David S. Campo, ... Yury Khudyakov in BMC Bioinformatics
    Article Open access 08 February 2022
  20. The Effect of Peer Punishment on the Evolution of Cooperation

    Punishment is an important mechanism promoting the evolution of cooperation among nonrelatives. We investigate the coevolution of cooperation and...
    Chapter 2022
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