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  1. Organism-Organism Interaction Models

    The models introduced in Chap. 7 considered a single group of organisms. Here, we will expand this into groups...
    David G Costa, Paul J Schulte in An Invitation to Mathematical Biology
    Chapter 2023
  2. C. elegans is not a robust model organism for the magnetic sense

    Magnetoreception is defined as the ability to sense and use the Earth’s magnetic field, for example to orient and direct movements. The receptors and...

    Erich Pascal Malkemper, Patrycja Pikulik, ... Monika Scholz in Communications Biology
    Article Open access 04 March 2023
  3. Rediscovering Chara as a model organism for molecular and evo-devo studies

    Chara has been used as a model for decades in the field of plant physiology, enabling the investigation of fundamental physiological processes. In...

    Katarina Kurtović, Vojtěch Schmidt, ... Jan Petrášek in Protoplasma
    Article 25 October 2023
  4. Daphnia magna as a Model Organism to Predict the Teratogenic Effect of Different Compounds

    For aquatic ecosystem Daphnia magna is evolving as a model organism to check the teratogenicity of numerous compounds. D. magna can be easily...
    Monalisa Mishra in Teratogenicity Testing
    Protocol 2024
  5. The Organism in Evolutionary Explanation: From Early Twentieth Century to the Extended Evolutionary Synthesis

    In recent years there have been a number of calls for integrating developmental and organismal phenomena into evolutionary theory. This so-called...
    Chapter Open access 2023
  6. Arbuscular Mycorrhizae and Mycorrhizae Helper Organism—A Synergistic Movement Towards Soil and Crop Sustainability

    The world is in verge of facing tremendous challenges to provide sufficient food for the increasing population in next decades. To maintain the...
    Chapter 2024
  7. Ontologies in Evolutionary Biology: The Role of the Organism in the Two Syntheses

    This paper examines evolutionary ontologies from Darwin’s work to the genesis and maturation of the Modern Evolutionary Synthesis, followed by the...
    David Cortés-García, Arantza Etxeberria Agiriano in Life and Mind
    Chapter 2023
  8. Diagnostic Potential of Free Blood Choline as a Biomarker of the Physiological Status of the Organism

    Abstract

    Choline is an essential nutrient. Mitochondrial dysfunctions, oxidative stress and associated risks of develo** non-alcoholic fatty liver...

    E. I. Savelieva, M. A. Leninskii, N. V. Goncharov in Journal of Evolutionary Biochemistry and Physiology
    Article 01 November 2023
  9. Alternative splicing level related to intron size and organism complexity

    Background

    Alternative splicing is the process of selecting different combinations of splice sites to produce variably spliced mRNAs. However, the...

    Pengcheng Yang, Depin Wang, Le Kang in BMC Genomics
    Article Open access 25 November 2021
  10. Towards organism-level systems biology by next-generation genetics and whole-organ cell profiling

    The system-level identification and analysis of molecular and cellular networks in mammals can be accelerated by “next-generation” genetics, which is...

    Yoichi Minami, Yufei Yuan, Hiroki R. Ueda in Biophysical Reviews
    Article 18 November 2021
  11. Stochastic Model of Infection with the SARS–COV–2 Virus in a Small Group of Individuals Indoors

    A mathematical model of viral infection of a small group of people randomly moving indoors is proposed. The model consists of two different modules....
    Derevich Igor, Panova Anastasiia in Bioinformatics and Biomedical Engineering
    Conference paper 2023
  12. Efficiency in Organism-Environment Information Exchanges: A Semantic Hierarchy of Logical Types Based on the Trial-and-Error Strategy Behind the Emergence of Knowledge

    Based on Kolchinsky and Wolpert’s work on the semantics of autonomous agents, I propose an application of Mathematical Logic and Probability to model...

    Mattia Berera in Biosemiotics
    Article 12 March 2024
  13. Multicellular Organism Propagation

    The essential principle of life perpetuation through uninterrupted life cycles of individual organisms is described in detail. During this process,...
    Carlos E. Semino in The Never-Ending Story of Life
    Chapter 2021
  14. Novel Organism Verification and Analysis (NOVA) study: identification of 35 clinical isolates representing potentially novel bacterial taxa using a pipeline based on whole genome sequencing

    Background

    Reliable species identification of cultured isolates is essential in clinical bacteriology. We established a new study algorithm named NOVA...

    Veronika Muigg, Helena M.B. Seth-Smith, ... Daniel Goldenberger in BMC Microbiology
    Article Open access 05 January 2024
  15. Oxidative effects of the human antifungal drug clotrimazole on the eucaryotic model organism Saccharomyces cerevisiae

    Clotrimazole is a type of antifungal medication developed from azole compounds. It exhibits several biological actions linked to oxidative stress....

    Berna Kavakcıoğlu Yardımcı, Leman Tarhan in Archives of Microbiology
    Article 07 June 2024
  16. Oxygen-Dependent Adaptation Processes in a Human Organism in Normal Living Conditions and during Space Flight

    Abstract

    The review examines various parties of oxygen-dependent human adaptation to microgravity belonging to different levels of the integral system...

    I. M. Larina, L. B. Buravkova, A. I. Grigoriev in Human Physiology
    Article 01 December 2022
  17. INFIMA leverages multi-omics model organism data to identify effector genes of human GWAS variants

    Genome-wide association studies reveal many non-coding variants associated with complex traits. However, model organism studies largely remain as an...

    Chenyang Dong, Shane P. Simonett, ... Sündüz Keleş in Genome Biology
    Article Open access 23 August 2021
  18. Caenorhabditis elegans as an In Vivo Model Organism to Elucidate Teratogenic Effects

    Exogenous teratogens contribute to approximately 10% of the human abnormality with exposure occurrence during the prenatal and fetal period. However,...
    Zhenglu Wang in Teratogenicity Testing
    Protocol 2024
  19. Comprehensive whole-genome sequencing reveals genetic characteristics of Colletotrichum fructicola (Nara gc5) the causative organism of circular leaf spot disease of rubber (Hevea brasiliensis)

    Hevea brasiliensis (Para rubber tree) is a commercially cultivated crop for latex production worldwide. Rubber trees from Southern states of India...

    V. K. Vineeth, T. R. Reshma, ... Chidambareswaren Mahadevan in Journal of Plant Pathology
    Article 03 February 2024
  20. Group Variability of Morphological Features in the Leaves of Betula pendula Roth (Betulaceae, Magnoliópsida) in the Gradient of Weather Conditions and Technogenic Soil Transformation

    Abstract

    The group variability of morphological features of the leaves of Betula pendula Roth was studied in the gradients of adverse weather...

    T. V. Zhuikova, E. V. Meling, A. S. Popova in Biology Bulletin
    Article 01 December 2023
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