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  1. EVATOM: an optical, label-free, machine learning assisted embryo health assessment tool

    The combination of a good quality embryo and proper maternal health factors promise higher chances of a successful in vitro fertilization (IVF)...

    Neha Goswami, Nicola Winston, ... Gabriel Popescu in Communications Biology
    Article Open access 05 March 2024
  2. Imagining the future of optical microscopy: everything, everywhere, all at once

    The optical microscope has revolutionized biology since at least the 17 th Century. Since then, it has progressed from a largely observational tool to...

    Harikrushnan Balasubramanian, Chad M. Hobson, ... Jesse S. Aaron in Communications Biology
    Article Open access 28 October 2023
  3. Flow Sorting–Assisted Optical Map**

    Optical map**—a technique that visualizes short sequence motives along DNA molecules of hundred kilobases to megabase in size—has found an...
    Hana Šimková, Zuzana Tulpová, Petr Cápal in Plant Cytogenetics and Cytogenomics
    Protocol 2023
  4. Exploring UAS-lidar as a sampling tool for satellite-based AGB estimations in the Miombo woodland of Zambia

    To date, only a limited number of studies have utilized remote sensing imagery to estimate aboveground biomass (AGB) in the Miombo ecoregion using...

    Hastings Shamaoma, Paxie W. Chirwa, ... Stephen Syampungani in Plant Methods
    Article Open access 08 June 2024
  5. Viewing life without labels under optical microscopes

    Optical microscopes today have pushed the limits of speed, quality, and observable space in biological specimens revolutionizing how we view life...

    Biswajoy Ghosh, Krishna Agarwal in Communications Biology
    Article Open access 25 May 2023
  6. All-optical voltage imaging-guided postsynaptic single-cell transcriptome profiling with Voltage-Seq

    Neuronal pathways recruit large postsynaptic populations and maintain connections via distinct postsynaptic response types (PRTs). Until recently,...

    Veronika Csillag, J. C. Noble, ... János Fuzik in Nature Protocols
    Article 04 June 2024
  7. Laser tweezers as a biophotonic tool to investigate the efficacy of living sickle red blood cells in response to optical deformation

    A laser tweezer technique based on single and/or dual-laser beams is proposed as a biophotonic tool to trap single cells and investigate their...

    Shaimaa M. Mohi, H. L. Saadon, Asaad A. Khalaf in Biophysical Reviews
    Article 08 March 2021
  8. Aptamer-Based Optical Sensors for Food Safety

    Food safety is a worldwide problem and ensuring food safety requires strict monitoring of toxins, antibiotics, and bacteria. Thus, sensitive methods...
    Chapter 2023
  9. Voltage-Seq: all-optical postsynaptic connectome-guided single-cell transcriptomics

    Understanding the routing of neuronal information requires the functional characterization of connections. Neuronal projections recruit large...

    Veronika Csillag, Marianne Hiriart Bizzozzero, ... János Fuzik in Nature Methods
    Article Open access 20 July 2023
  10. Zebrafish xenograft as a tool for the study of colorectal cancer: a review

    Colorectal cancer (CRC) is the second leading cause of cancer-related death, mostly due to metastatic disease and the fact that many patients already...

    Camilla Maria Fontana, Hien Van Doan in Cell Death & Disease
    Article Open access 09 January 2024
  11. Dynamic full-field optical coherence tomography module adapted to commercial microscopes allows longitudinal in vitro cell culture study

    Dynamic full-field optical coherence tomography (D-FFOCT) has recently emerged as a label-free imaging tool, capable of resolving cell types and...

    Tual Monfort, Salvatore Azzollini, ... Kate Grieve in Communications Biology
    Article Open access 28 September 2023
  12. Gold Nanoparticles as a Tool to Detect Biomarkers in Osteoarthritis: New Insights

    Extensive research over the years has revealed the remarkable potential of gold nanoparticles (AuNPs) for detecting biomarkers in osteoarthritis...

    Atul Mourya, Shristi Arya, ... Jitender Madan in Indian Journal of Microbiology
    Article 20 June 2024
  13. A neuropsin-based optogenetic tool for precise control of Gq signaling

    G q -coupled receptors regulate numerous physiological processes by activating enzymes and inducing intracellular Ca 2+ signals. There is a strong need...

    Ruicheng Dai, Tao Yu, ... Minmin Luo in Science China Life Sciences
    Article 12 May 2022
  14. Forces of Change: Optical Tweezers in Membrane Remodeling Studies

    Abstract

    Optical tweezers allow precise measurement of forces and distances with piconewton and nanometer precision, and have thus been instrumental...

    Sudheer K. Cheppali, Raviv Dharan, Raya Sorkin in The Journal of Membrane Biology
    Article 26 May 2022
  15. Adapting the High-Throughput Phenoty** Tool ALPHI® to Potatoes: First Results and Lessons

    This study aimed to provide the first results and lessons of the transfer of the ALPHI ® phenoty** tool to potato. The ALPHI ® device is a tractor...

    F. Degan, A. Fournier, ... J. P. Cohan in Potato Research
    Article 17 May 2024
  16. Second harmonic generation microscopy: a powerful tool for bio-imaging

    Second harmonic generation (SHG) microscopy is an important optical imaging technique in a variety of applications. This article describes the...

    Arash Aghigh, Stéphane Bancelin, ... François Légaré in Biophysical Reviews
    Article Open access 19 January 2023
  17. Benchmarking MicrobIEM – a user-friendly tool for decontamination of microbiome sequencing data

    Background

    Microbiome analysis is becoming a standard component in many scientific studies, but also requires extensive quality control of the 16S...

    Claudia Hülpüsch, Luise Rauer, ... Avidan U. Neumann in BMC Biology
    Article Open access 23 November 2023
  18. Debiased ambient vibrations optical coherence elastography to profile cell, organoid and tissue mechanical properties

    The role of the mechanical environment in defining tissue function, development and growth has been shown to be fundamental. Assessment of the...

    Jonathan H. Mason, Lu Luo, ... Pierre O. Bagnaninchi in Communications Biology
    Article Open access 18 May 2023
  19. In vivo characterisation of field pea stem wall thickness using optical coherence tomography

    Background

    Modern field pea breeding faces a significant challenge in selecting lines with strong stems that resist lodging. Traditional methods of...

    Qi Fang, Felipe A. Castro-Urrea, ... Brendan F. Kennedy in Plant Methods
    Article Open access 11 October 2023
  20. Super-sectioning with multi-sheet reversible saturable optical fluorescence transitions (RESOLFT) microscopy

    Light-sheet fluorescence microscopy is an invaluable tool for four-dimensional biological imaging of multicellular systems due to the rapid...

    Andreas Bodén, Dirk Ollech, ... Ilaria Testa in Nature Methods
    Article Open access 23 February 2024
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