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Genomics-based identification of a cold adapted clade in Deinococcus
BackgroundMicrobes in the cold polar and alpine environments play a critical role in feedbacks that amplify the effects of climate change. Defining...
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Plastid phylogenomics and fossil evidence provide new insights into the evolutionary complexity of the ‘woody clade’ in Saxifragales
BackgroundThe “woody clade” in Saxifragales (WCS), encompassing four woody families (Altingiaceae, Cercidiphyllaceae, Daphniphyllaceae, and...
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Chloroplast genome characteristics and phylogeny of the sinodielsia clade (apiaceae: apioideae)
BackgroundThe Sinodielsia clade of the subfamily Apioideae (Apiacieae) was established in 2008, and it is composed of 37 species from 17 genera. Its...
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Phylogenomic approaches reveal a robust time-scale phylogeny of the Terminal Fusarium Clade
The Terminal Fusarium Clade (TFC) is a group in the Nectriaceae family with agricultural and clinical relevance. In recent years, various phylogenies...
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Emergence of putative energy parasites within Clostridia revealed by genome analysis of a novel endosymbiotic clade
The Clostridia is a dominant bacterial class in the guts of various animals and are considered to nutritionally contribute to the animal host. Here,...
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The nomenclature of the Catostemma clade (Malvaceae/Bombacoideae/Adansonieae)
Aguiaria , Catostemma , and Scleronema (Malvaceae) are restricted to Amazonia, and comprise 20 accepted (and one uncertain) species that are typically...
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Escherichia cryptic clade I is an emerging source of human intestinal pathogens
BackgroundWithin the genus Escherichia , several monophyletic clades other than the traditionally defined species have been identified. Of these,...
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Diversity and evolution of leaflet anatomical characters in the Pterocarpus clade (Fabaceae: Papilionoideae)
The Pterocarpus clade includes 23 genera previously attributed to different Fabaceae tribes. The recent rearrangements of many genera in the clade do...
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Phylogenomic analysis with improved taxon sampling corroborates an Alydidae + Hydarinae + Pseudophloeinae clade (Heteroptera: Coreoidea: Alydidae, Coreidae)
Recent phylogenomic analyses within the insect superfamily Coreoidea (Hemiptera: Heteroptera) have begun to challenge previous phylogenetic...
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Taxonomic characterisation of the Regianum clade (genus Tuber) and the trait evolution of spore size among true truffles
The genus Tuber comprises ectomycorrhizal fungal species producing belowground ascomata, including the gastronomically most prominent hypogeous...
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Species delimitation and coexistence in an ancient, depauperate vertebrate clade
BackgroundA major challenge to understanding how biodiversity has changed over time comes from depauperons, which are long-lived lineages with...
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Probing the thermo tolerant endosymbiont genus Durusdinium (Clade D) in the scleractinian corals of Palk Bay, Southeast coast of India
The world’s coral reef ecosystems are built by a symbiotic relationship between reef corals and the dinoflagellates of the family Symbiodiniaceae....
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Monophyletic blowflies revealed by phylogenomics
BackgroundBlowflies are ubiquitous insects, often shiny and metallic, and the larvae of many species provide important ecosystem services (e.g.,...
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Complete genome of Vibrio japonicus strain JCM 31412 T and assessment of the Nereis clade of the genus Vibrio
Clade-based taxonomy has become a recognised means of classifying members of the family Vibrionaceae . A multilocus sequence analysis (MLSA) approach...
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Comparative analysis of the processes involved in the loss of elaiophores in two species of the christianelloid clade (Malpighiaceae)
Alicia anisopetala and Callaeum psilophyllum are two closely related species that belong to the christianelloid clade of the family Malpighiaceae....
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The chloroplast genome of Farsetia hamiltonii Royle, phylogenetic analysis, and comparative study with other members of Clade C of Brassicaceae
BackgroundFarsetia hamiltonii Royle is a medicinally important annual plant from the Cholistan desert that belongs to the tribe Anastaticeae and...
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Genomic analyses reveal a low-temperature adapted clade in Halorubrum, a widespread haloarchaeon across global hypersaline environments
BackgroundCold-adapted archaea have diverse ecological roles in a wide range of low-temperature environments. Improving our knowledge of the genomic...
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Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach
Currently, over 190 species in family Vibrionaceae , including not-yet-cultured taxa, have been described and classified into over nine genera, in...
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“Cladus” and clade: a taxonomic odyssey
The fate of “clade,” both as concept and word, is reconstructed here beginning with its first appearance in 1866 as “Cladus,” in Haeckel’s Generelle...
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Immature Stages and New Host Plant Records for Three Species in the “Taygetis Clade” of Euptychiina in Southeastern Peru (Lepidoptera: Nymphalidae: Satyrinae)
We report here the immature stages and natural host plants for three species in the so-called “ Taygetis clade” of the nymphalid butterfly subtribe...
