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Gene Linkage
The proximity of a pair of genes located on the same chromosome affects their independent distribution because recombination between them is less...
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Genetic linkage map construction and QTL analysis for plant height in proso millet (Panicum miliaceum L.)
Key messageA genetic linkage map representing proso millet genome was constructed with SSR markers, and a major QTL corresponding to plant height was...
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Construction of a high-density genetic linkage map and QTL analysis using an interspecific F1 population in pistachio
Pistachio ( Pistacia vera L.) is one of the commercially important cultivated nut tree species in Turkey. Pistachio nuts have many beneficial...
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Construction of high density linkage maps in almond and synteny analysis with peach, Japanese apricot and sweet cherry genomes
Almond ( Prunus dulcis (Mill) D.A. Webb) is the only nut tree species in Rosaceae family and it is one of the most important nut crops all over the...
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Analysis of FctB3 crystal structure and insight into its structural stabilization and pilin linkage mechanisms
Streptococcus pyogenes harboring an FCT type 3 genomic region display pili composed of three types of pilins. In this study, the structure of the...
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Effect of genoty** errors on linkage map construction based on repeated chip analysis of two recombinant inbred line populations in wheat (Triticum aestivum L.)
Linkage maps are essential for genetic map** of phenotypic traits, gene map-based cloning, and marker-assisted selection in breeding applications....
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Combined linkage analysis and association map** identifies genomic regions associated with yield-related and drought-tolerance traits in wheat (Triticum aestivum L.)
Key messageCombined linkage analysis and association map** identified genomic regions associated with yield and drought tolerance, providing...
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Genetic characterization and linkage analysis of spotted leaf 6, liguleless and lax panicle traits in mutant rice
Phenotypic mutants are valuable resources for elucidating the function of genes responsible for their expression. This study examined mutant rice...
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Combined linkage map** and association analysis uncovers candidate genes for 25 leaf-related traits across three environments in maize
Key messageCombined linkage and association analysis revealed five co-localized genetic loci across multiple environments. The key gene Zm00001d026491 ...
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Linkage drag analysis in three Aegilops speltoides introgressions carrying Sr47 in modern durum and hard red spring wheat germplasm
Key messageYield and quality tests of wheat lines derived from RWG35 show they carry little, or no linkage drag and are the preferred source of Sr47 ...
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Linkage Disequilibrium Statistics and Block Visualization
Linkage disequilibrium analysis enables researchers to interrogate the genome for patterns of coinheritance between genetic markers. Visualizing...
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Simultaneous and sialic acid linkage-specific N- and O-linked glycan analysis by ester-to-amide derivatization
Characterization of O -glycans linked to serine or threonine residues in glycoproteins has mostly been achieved using chemical reaction approaches...
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Map** of genomic regions linked to stemphylium blight (Stemphylium botryosum Wallr.) resistance in lentil using linkage map** and marker-trait association analysis
Stemphylium blight caused by Stemphylium botryosum, is a foliar disease of lentil. It affects the productivity and milling quality of lentil crops,...
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Imputation of SNPs associated with presbycusis through linkage disequilibrium analysis in the ILDR1 gene
The single-nucleotide polymorphisms (SNP) ILDR1 rs2332035 has shown a high statistical association with presbycusis (hearing loss with age or...
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The first genetic linkage map of sea buckthorn (Hippophae rhamnoides) and QTL map** of growth-related traits
Sea buckthorn ( Hippophae rhamnoides ), a hardy deciduous shrub of the family Elaeagnaceae, is known for its economic and ecological importance due to...
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Genetic Effects in Populations Under Linkage Equilibrium
In this chapter, models of genetic effects at the population level are provided that cover all the genetic architectures considered in the previous...
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Map** and characterization of a novel adult-plant leaf rust resistance gene LrYang16G216 via bulked segregant analysis and conventional linkage method
Key messageA novel adult-plant leaf rust resistance gene LrYang16G216 on wheat chromosome 6BL was identified and mapped to a 0.59 cM genetic...
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Linkage map construction using limited parental genotypic information
Genetic linkage maps based on single nucleotide polymorphisms (SNPs) represent an essential tool for a variety of genomic analyses. Today,...
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Using probabilistic genotypes in linkage analysis of polyploids
Key messageIn polyploids, linkage map** is carried out using genoty** with discrete dosage scores. Here, we use probabilistic genotypes and we...
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The impact of linkage disequilibrium and epistasis in the studies of inheritance based on Hayman’s diallel and generation mean analysis
This simulation-based study assessed the impact of linkage disequilibrium (LD) and epistasis on Hayman’s diallel and generation mean analysis,...