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  1. Perennial intermediate wheatgrass accumulates more soil organic carbon than annual winter wheat – a model assessment

    Purpose

    Perennial crops have been suggested as a more sustainable alternative to the currently most common crop** systems. Compared with annual...

    Fiona H. M. Tang, Timothy E. Crews, ... Giulia Vico in Plant and Soil
    Article Open access 29 September 2023
  2. Carbonate compensation depth drives abyssal biogeography in the northeast Pacific

    Abyssal seafloor communities cover more than 60% of Earth’s surface. Despite their great size, abyssal plains extend across modest environmental...

    Erik Simon-Lledó, Diva J. Amon, ... Daniel O. B. Jones in Nature Ecology & Evolution
    Article Open access 24 July 2023
  3. Comparing the deep root growth and water uptake of intermediate wheatgrass (Kernza®) to alfalfa

    Aims

    Perennial crops with more extensive and deep root systems could access deep stored water and build resilience to water shortage. In the context...

    Corentin Clément, Joost Sleiderink, ... Kristian Thorup-Kristensen in Plant and Soil
    Article 19 January 2022
  4. Invertebrate Richness and Hatching Decrease with Sediment Depth in Neotropical Intermittent Ponds

    Some groups of invertebrates from intermittent wetlands produce dormant stages in response to environmental fluctuations. Dormancy is a strategy to...

    Pedro Henrique de Oliveira Hoffmann¹, Andressa Adolfo², ... Cristina Stenert in Wetlands
    Article 13 March 2023
  5. Origin of current intermediate wheatgrass germplasm being developed for Kernza grain production

    Intermediate wheatgrass (IWG, Thinopyrum intermedium [Host] Barkworth & D. R. Dewey) has been developed as a perennial grain crop for human...

    Jared Crain, Peggy Wagoner, ... Lee DeHaan in Genetic Resources and Crop Evolution
    Article Open access 30 March 2024
  6. eDNA metabarcoding reveals biodiversity and depth stratification patterns of dinoflagellate assemblages within the epipelagic zone of the western Coral Sea

    Background

    Dinoflagellates play critical roles in the functioning of marine ecosystems but also may pose a hazard to human and ecosystem health by...

    Megan Carve, Tahnee Manning, ... Jeff Shimeta in BMC Ecology and Evolution
    Article Open access 26 March 2024
  7. Phycobilisome light-harvesting efficiency in natural populations of the marine cyanobacteria Synechococcus increases with depth

    Cyanobacteria of the genus Synechococcus play a key role as primary producers and drivers of the global carbon cycle in temperate and tropical...

    Yuval Kolodny, Yoav Avrahami, ... Nir Keren in Communications Biology
    Article Open access 22 July 2022
  8. Chinook salmon depth distributions on the continental shelf are shaped by interactions between location, season, and individual condition

    Background

    Ecological and physical conditions vary with depth in aquatic ecosystems, resulting in gradients of habitat suitability. Although variation...

    Cameron Freshwater, Sean C. Anderson, ... Jackie King in Movement Ecology
    Article Open access 15 March 2024
  9. Detailed analysis of distorted retinal and its interaction with surrounding residues in the K intermediate of bacteriorhodopsin

    The K intermediate of proton pum** bacteriorhodopsin is the first intermediate generated after isomerization of retinal to the 13- cis form....

    Shoun Taguchi, Satomi Niwa, ... Kazuki Takeda in Communications Biology
    Article Open access 17 February 2023
  10. Differing lesion recovery rates of two Caribbean stony coral species across a shallow water to mesophotic depth gradient suggest different sensitivity to repeated disturbance

    Following major stress events such as storms, bleaching events, or disease outbreaks, surviving corals must regenerate tissue to recover. We aimed to...

    Joseph E. Townsend, Marilyn E. Brandt, ... Tyler B. Smith in Coral Reefs
    Article 17 August 2023
  11. Does selection occur at the intermediate zone of two insufficiently isolated populations? A whole-genome analysis along an altitudinal gradient

    Adaptive divergence occurs even between insufficiently isolated populations when there is a great difference in environments between their habitats....

    Naofumi Yoshida, Shin-Ichi Morinaga, ... Kouki Hikosaka in Journal of Plant Research
    Article 22 December 2022
  12. Ocean depth–temperature profiles for operational oceanography from a shark-borne transmitter

    Background

    Many regions of the ocean are under-sampled in terms of their biology and physical structure. Increasingly sophisticated animal-borne...

    Kim Holland, Carl Meyer, ... Melinda Holland in Animal Biotelemetry
    Article Open access 19 November 2022
  13. Intermediate disturbance hypothesis explains eutrophication and biodiversity pattern in a boreal river basin, China

    Eutrophication is a common phenomenon in aquatic ecosystems caused by human disturbance and is regarded as one of the major threats to biodiversity...

    Shuang Tian, Xuwang Yin in Hydrobiologia
    Article 20 July 2022
  14. Intermediate complex morphophysiological dormancy in seeds of Aconitum barbatum (Ranunculaceae)

    Background

    Seed dormancy and germination are key components of plant regeneration strategies. Aconitum barbatum is a plant commonly found in...

    Lei Zhang, Chaohan Xu, ... Keliang Zhang in BMC Plant Biology
    Article Open access 05 July 2023
  15. Fish sounds of photic and mesophotic coral reefs: variation with depth and type of island

    Mesophotic Coral Ecosystems remain largely unexplored. The aim of this study was to determine how the acoustic fish biodiversity varied depending on...

    Xavier Raick, Lucia Di Iorio, ... Éric Parmentier in Coral Reefs
    Article 03 January 2023
  16. An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype

    Background

    Association of chromatin with lamin proteins at the nuclear periphery has emerged as a potential mechanism to coordinate cell type-specific...

    Parisha P. Shah, Kathleen C. Keough, ... Rajan Jain in Genome Biology
    Article Open access 23 January 2023
  17. Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspring data

    Potato is one of the world’s major staple crops, and like many important crop plants, it has a polyploid genome. Polyploid haplotype assembly poses a...

    Rebecca Serra Mari, Sven Schrinner, ... Tobias Marschall in Genome Biology
    Article Open access 19 January 2024
  18. Mesophotic zone as refuge: acclimation and in-depth proteomic response of yellow gorgonians in the Mediterranean sea

    The intensification of warming-induced mass-mortalities in invertebrate populations including in temperate regions is a critical global issue....

    Anaïs Beauvieux, Bastien Mérigot, ... Quentin Schull in Coral Reefs
    Article 04 March 2024
  19. Moment estimators of relatedness from low-depth whole-genome sequencing data

    Background

    Estimating relatedness is an important step for many genetic study designs. A variety of methods for estimating coefficients of pairwise...

    Anthony F. Herzig, M. Ciullo, ... H. Perdry in BMC Bioinformatics
    Article Open access 24 June 2022
  20. Drones and Bathymetry Show the Importance of Optimal Water Depth for Nest Placement Within Breeding Colonies of Western and Clark’s Grebes

    Habitat selection involves a series of decisions that are arguably the most important decisions that animals make and these decisions occur at...

    Deo A. Lachman, Courtney J. Conway, ... Diane Evans Mack in Wetlands
    Article 07 November 2022
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