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Showing 1-20 of 3,987 results
  1. Whole-Mount RNA In Situ Hybridization of Zebrafish Embryos

    A commonly employed technique in molecular biology to evaluate the temporal and spatial expression of a certain gene is in situ hybridization. This...
    İsmail Ünal, Derya Cansız, ... Ebru Emekli-Alturfan in Teratogenicity Testing
    Protocol 2024
  2. A rapid and sensitive, multiplex, whole mount RNA fluorescence in situ hybridization and immunohistochemistry protocol

    Background

    In the past few years, there has been an explosion in single-cell transcriptomics datasets, yet in vivo confirmation of these datasets is...

    Tian Huang, Bruno Guillotin, ... Doris Wagner in Plant Methods
    Article Open access 22 November 2023
  3. Colorimetric Whole-Mount In Situ Hybridization in Planarians

    Whole-mount in situ hybridization (WISH) is an extremely useful technique for visualizing specific mRNA targets and solving many biological...
    Susanna Fraguas, Mª. Dolores Molina, Francesc Cebrià in Schmidtea Mediterranea
    Protocol 2023
  4. Whole-Mount In Situ Hybridization in Large Sexual Schmidtea mediterranea

    Whole-mount in situ hybridization (WISH), colorimetric or fluorescent (FISH), allows for the visualization of endogenous RNA. For planarians, robust...
    Miquel Vila-Farré, Hanh Thi-Kim Vu, Jochen C. Rink in Schmidtea Mediterranea
    Protocol 2023
  5. Whole-Mount In Situ Hybridization (WISH) for Salamander Embryos and Larvae

    Whole-mount in situ hybridization (WISH) is widely used to visualize transcribed gene sequences (mRNA) in develo** embryos, larvae, and other...
    Sruthi Purushothaman, Ashley W. Seifert in Salamanders
    Protocol 2023
  6. Whole-mount RNA in situ hybridization technique in Torenia ovules

    The expression pattern of an interested gene at a cellular level provides strong evidence for its functions. RNA in situ hybridization has been...

    Shihao Su, Xuan Zhou, Tetsuya Higashiyama in Plant Reproduction
    Article 21 December 2022
  7. Single-Molecule Fluorescent In Situ Hybridization (smFISH) on Whole-Mount Planarians

    Since the establishment of planarian species as laboratory models, investigation of molecular pathways has relied heavily on visualization of...
    Elke F. Roovers, Kerstin Bartscherer in Schmidtea Mediterranea
    Protocol 2023
  8. Whole-Mount In Situ Hybridization for Detection of Migrating Zebrafish Endodermal Cells

    One of the most important events in early vertebrate development is the formation and positioning of the endoderm, the embryonic progenitor cell...
    Antonius L. van Boxtel in Cell Migration in Three Dimensions
    Protocol 2023
  9. Analysis of Gene Expression Patterns and RNA Localization by Fluorescence in Situ Hybridization in Whole Mount Drosophila Testes

    Researchers have used RNA in situ hybridization to detect the presence of RNA in cells and tissues for approximately 50 years. The recent development...
    Jaclyn M. Fingerhut, Yukiko M. Yamashita in RNA-Protein Complexes and Interactions
    Protocol 2023
  10. Hybridization Chain Reaction Fluorescence In Situ Hybridization (HCR-FISH) in Ambystoma mexicanum Tissue

    In situ hybridization is a standard procedure for visualizing mRNA transcripts in tissues. The recent adoption of fluorescent probes and new signal...
    Alex M. Lovely, Timothy J. Duerr, ... James R. Monaghan in Salamanders
    Protocol 2023
  11. Whole mount multiplexed visualization of DNA, mRNA, and protein in plant-parasitic nematodes

    Background

    Plant-parasitic nematodes compromise the agriculture of a wide variety of the most common crops worldwide. Obtaining information on the...

    Alexis L. Sperling, Sebastian Eves-van den Akker in Plant Methods
    Article Open access 04 December 2023
  12. 3D exploration of gene expression in chicken embryos through combined RNA fluorescence in situ hybridization, immunofluorescence, and clearing

    Background

    Fine characterization of gene expression patterns is crucial to understand many aspects of embryonic development. The chicken embryo is a...

    Maëlys André, Sarah Dinvaut, ... Julien Falk in BMC Biology
    Article Open access 03 June 2024
  13. Gene Expression Patterns in the Ctenophore Pleurobrachia bachei: In Situ Hybridization

    In situ hybridization is a powerful and precise tool for revealing cell- and tissue-specific gene expression and a critical approach to validating...
    Andrea B. Kohn, Yelena Bobkova, Leonid L. Moroz in Ctenophores
    Protocol 2024
  14. Formamide-Free Genomic In Situ Hybridization (ff-GISH)

    Fluorescence in situ hybridization allows for the map** of various sequence types in the genomes and is thus widely used in structural, functional,...
    Hanna Weiss-Schneeweiss, Tae-Soo Jang in Plant Cytogenetics and Cytogenomics
    Protocol 2023
  15. Whole-Mount RNA, Single-Molecule RNA (smRNA), and DNA Fluorescence In Situ Hybridization (FISH) in Mammalian Embryos

    Fluorescence in situ hybridization (FISH) provides a valuable tool for studying the spatial localization of and expression level of genes and cell...
    Jesica Canizo, Katherine Vandal, ... Sophie Petropoulos in Embryo Models In Vitro
    Protocol 2023
  16. Whole-mount smFISH allows combining RNA and protein quantification at cellular and subcellular resolution

    Multicellular organisms result from complex developmental processes largely orchestrated through the quantitative spatiotemporal regulation of gene...

    Lihua Zhao, Alejandro Fonseca, ... Stefanie Rosa in Nature Plants
    Article Open access 15 June 2023
  17. Novel whole-mount FISH analysis for intact root of Arabidopsis thaliana with spatial reference to 3D visualization

    Whole-mount fluorescent in situ hybridization (WM-FISH) is an effective tool to observe chromosome behavior in tissues or organs. However, it is...

    Suzuka Kikuchi, Takuya Sakamoto, ... Akitoshi Iwamoto in Journal of Plant Research
    Article 31 January 2023
  18. Combined whole-mount fluorescence in situ hybridization and antibody staining in zebrafish embryos and larvae

    RNA fluorescence in situ hybridization (FISH) and antibody staining/immunofluorescence (IF) are widely used to detect distributions of mRNAs and...

    Jianbo He, Dashuang Mo, ... Lingfei Luo in Nature Protocols
    Article 09 September 2020
  19. Preparing Planarian Cells for High-Content Fluorescence Microscopy Using RNA in Situ Hybridization and Immunocytochemistry

    High-content fluorescence microscopy combines the efficiency of high-throughput techniques with the ability to extract quantitative information from...
    Markus A. Grohme, Olga Frank, Jochen C. Rink in Schmidtea Mediterranea
    Protocol 2023
  20. In Situ Hybridization to Identify Stem Cells in the Freshwater Sponge Ephydatia fluviatilis

    Sponges (Porifera) are a large phylum that includes an enormous number of species. They are classified into four classes. Among these four classes,...
    Chiaki Kojima, Noriko Funayama in Whole-Body Regeneration
    Protocol Open access 2022
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