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  1. A novel hybrid model to predict concomitant diseases for Hashimoto’s thyroiditis

    Hashimoto’s thyroiditis is an autoimmune disorder characterized by the destruction of thyroid cells through immune-mediated mechanisms involving...

    Pınar Karadayı Ataş in BMC Bioinformatics
    Article Open access 24 August 2023
  2. A hybrid Stacking-SMOTE model for optimizing the prediction of autistic genes

    Purpose

    Autism spectrum disorder(ASD) is a disease associated with the neurodevelopment of the brain. The autism spectrum can be observed in early...

    Eman Ismail, Walaa Gad, Mohamed Hashem in BMC Bioinformatics
    Article Open access 06 October 2023
  3. Hybrid AI model for estimating the canopy photosynthesis of eggplants

    Modern models for estimating canopy photosynthetic rates ( A c ) can be broadly classified into two categories, namely, process-based mechanistic models...

    Koichi Nomura, Takahiro Kaneko, ... Masaharu Kitano in Photosynthesis Research
    Article 28 October 2022
  4. NmTHC: a hybrid error correction method based on a generative neural machine translation model with transfer learning

    Backgrounds

    The single-pass long reads generated by third-generation sequencing technology exhibit a higher error rate. However, the circular...

    Rongshu Wang, Jianhua Chen in BMC Genomics
    Article Open access 07 June 2024
  5. Time series-based hybrid ensemble learning model with multivariate multidimensional feature coding for DNA methylation prediction

    Background

    DNA methylation is a form of epigenetic modification that impacts gene expression without modifying the DNA sequence, thereby exerting...

    Wu Yan, Li Tan, ... Wu Fu-an in BMC Genomics
    Article Open access 11 December 2023
  6. Protein–protein interaction site prediction by model ensembling with hybrid feature and self-attention

    Background

    Protein–protein interactions (PPIs) are crucial in various biological functions and cellular processes. Thus, many computational approaches...

    Hanhan Cong, Hong Liu, ... Yuehui Chen in BMC Bioinformatics
    Article Open access 05 December 2023
  7. An adaptive multi-modal hybrid model for classifying thyroid nodules by combining ultrasound and infrared thermal images

    Background

    Two types of non-invasive, radiation-free, and inexpensive imaging technologies that are widely employed in medical applications are...

    Na Zhang, Juan Liu, ... Meng Wu in BMC Bioinformatics
    Article Open access 19 August 2023
  8. An Optimized Hybrid ARIMA-LSTM Model for Time Series Forecasting of Agricultural Production in India

    The role of agriculture in a country’s national income is very important. The zero-hunger sustainable goal of the United Nations cannot be achieved...
    Chapter 2024
  9. HEC-ASD: a hybrid ensemble-based classification model for predicting autism spectrum disorder disease genes

    Purpose

    Autism spectrum disorder (ASD) is the most prevalent disease today. The causes of its infection may be attributed to genetic causes by 80% and...

    Eman Ismail, Walaa Gad, Mohamed Hashem in BMC Bioinformatics
    Article Open access 21 December 2022
  10. Large-scale lexical and genetic alignment supports a hybrid model of Han Chinese demic and cultural diffusions

    The Han Chinese history is shaped by substantial demographic activities and sociocultural transmissions. However, it remains challenging to assess...

    Chengkun Yang, **aoxi Zhang, ... Menghan Zhang in Nature Human Behaviour
    Article 13 May 2024
  11. Bone Regeneration with 3D-Printed Hybrid Bone Scaffolds in a Canine Radial Bone Defect Model

    Background:

    The repair of large bone defects remains a significant challenge in clinical practice and requires bone grafts or substitute materials. In...

    Yoon Jae Lee, Yeon Hee Ryu, ... Jong Won Rhie in Tissue Engineering and Regenerative Medicine
    Article 26 September 2022
  12. Lokatt: a hybrid DNA nanopore basecaller with an explicit duration hidden Markov model and a residual LSTM network

    Background

    Basecalling long DNA sequences is a crucial step in nanopore-based DNA sequencing protocols. In recent years, the CTC-RNN model has become...

    Xuechun Xu, Nayanika Bhalla, ... Joakim Jaldén in BMC Bioinformatics
    Article Open access 07 December 2023
  13. A successful hybrid deep learning model aiming at promoter identification

    Background

    The zone adjacent to a transcription start site (TSS), namely, the promoter, is primarily involved in the process of DNA transcription...

    Ying Wang, Qinke Peng, ... **ao Wang in BMC Bioinformatics
    Article Open access 31 May 2022
  14. Hybrid-hybrid correction of errors in long reads with HERO

    Although generally superior, hybrid approaches for correcting errors in third-generation sequencing (TGS) reads, using next-generation sequencing...

    **ongbin Kang, Jialu Xu, ... Alexander Schönhuth in Genome Biology
    Article Open access 01 December 2023
  15. Identifying QTLs involved in hybrid performance and heterotic group complementarity: new GWAS models applied to factorial and admixed diallel maize hybrid panels

    Key message

    An original GWAS model integrating the ancestry of alleles was proposed and allowed the detection of background specific additive and...

    Aurélien Beugnot, Tristan Mary-Huard, ... Julie B. Fievet in Theoretical and Applied Genetics
    Article Open access 10 October 2023
  16. An integrated model to optimize planting density and sufficient irrigation depth for increasing hybrid maize seeds yield

    Optimizing planting density and irrigation depth of hybrid maize seed production is important for ensuring food and water security. A higher planting...

    Rongchao Shi, Ling Tong, ... Yonghui Qin in Irrigation Science
    Article 06 July 2022
  17. ARIMAX—Artificial neural network hybrid model for predicting semilooper (Chrysodeixis acuta) incidence on soybean

    Insect pest and weather relations analysed using statistical models empower crop pest management through their capacity to forewarn abundance or...

    Mathyam Prabhakar, Sengottaiyan Vennila, ... S. K. Yadav in International Journal of Tropical Insect Science
    Article 28 September 2022
  18. Improving hybrid rice breeding programs via stochastic simulations: number of parents, number of hybrids, tester update, and genomic prediction of hybrid performance

    Key message

    Schemes that use genomic prediction outperform others, updating testers increases hybrid genetic gain, and larger population sizes tend to...

    Roberto Fritsche-Neto, Jauhar Ali, ... Marlee Rose Labroo in Theoretical and Applied Genetics
    Article Open access 12 December 2023
  19. Hybrid origin and hybrid status of the endangered Ilex sanqingshanensis revealed by molecular and morphological evidence

    Identification of natural hybrids considered as endangered species is of vital importance in taxonomy and biodiversity conservation, as natural...

    Wei-li Liu, Dan-qi Li, ... Yi Yang in Plant Systematics and Evolution
    Article 04 May 2024
  20. A CNN-LSTM-att hybrid model for classification and evaluation of growth status under drought and heat stress in chinese fir (Cunninghamia lanceolata)

    Background

    Cunninghamia lanceolata (Chinese fir), is one of the most important timber trees in China. With the global warming, to develop new...

    Dong **ng, Yulin Wang, ... Erpei Lin in Plant Methods
    Article Open access 03 July 2023
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