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Median Filtering Detection Using Markov Process in Digital Images
Digital images are prevalent medium for information representation. The wide acceptability of images also leads to some problems. Few people spread...
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A data-driven network decomposition of the temporal, spatial, and spectral dynamics underpinning visual-verbal working memory processes
The brain dynamics underlying working memory (WM) unroll via transient frequency-specific large-scale brain networks. This multidimensionality (time,...
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Movement modeling and patterns of within- and among-individual behavioral variation across time scales in neonate garter snakes (Thamnophis elegans)
AbstractAnimal movement modeling and animal personality frameworks are both useful approaches to identify patterns of behavioral variation. Yet these...
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Ancestral Population Genomics with Jocx, a Coalescent Hidden Markov Model
Coalescence theory lets us probe the past demographics of present-day genetic samples and much information about the past can be gleaned from...
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Hunting mode and habitat selection mediate the success of human hunters
BackgroundAs a globally widespread apex predator, humans have unprecedented lethal and non-lethal effects on prey populations and ecosystems. Yet...
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Resolving intra-repeat variation in medically relevant VNTRs from short-read sequencing data using the cardiovascular risk gene LPA as a model
BackgroundVariable number tandem repeats (VNTRs) are highly polymorphic DNA regions harboring many potentially disease-causing variants. However,...
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Individual differences in diel and vertical activity patterns in a large pelagic predator, the oceanic whitetip shark
Diel activity patterns and fine-scale behavior of large pelagic fishes have been poorly studied relative to their coastal counterparts. In...
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Bayesian analysis of biodiversity patterns via beam trawl versus video transect—a comparative case study of Svalbard rhodolith beds
Knowledge of spatial biodiversity patterns is important for ecosystem assessment. Rhodoliths, free-living calcareous algae, are biotic components...
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From Ensemble FRET to Single-Molecule Imaging: Monitoring Individual Cellular Machinery in Action
Fluorescence resonance energy transfer is a suitable approach for observing conformational changes in biomolecules, as it is a “spectroscopic...
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Clinical application of mesenchymal stem cell in regenerative medicine: a narrative review
The multipotency property of mesenchymal stem cells (MSCs) has attained worldwide consideration because of their immense potential for...
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Polycyclic aromatic hydrocarbon (PAH) biodegradation capacity revealed by a genome-function relationship approach
BackgroundPolycyclic aromatic hydrocarbon (PAH) contamination has been a worldwide environmental issue because of its impact on ecosystems and human...
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Exact transcript quantification over splice graphs
BackgroundThe probability of sequencing a set of RNA-seq reads can be directly modeled using the abundances of splice junctions in splice graphs...
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Nocturnal and diurnal predator and prey interactions with crab spider color polymorphs
AbstractUnderstanding the complex interplay of factors sha** polymorphic changes within individuals represents a longstanding conundrum in biology....
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Estimating Phylogenetic Trees
The third chapter covers a probability model of molecular evolution in a way designed to engage the readers with little interest in mathematics. That...
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Identification and analysis of MAPK cascade gene families of Camellia oleifera and their roles in response to cold stress
BackgroundLow-temperature severely limits the growth and development of Camellia oleifera ( C. oleifera ). The mitogen-activated protein kinase (MAPK)...
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The maximum entropy principle for compositional data
BackgroundCompositional systems, represented as parts of some whole, are ubiquitous. They encompass the abundances of proteins in a cell, the...
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Global patterns and rates of habitat transitions across the eukaryotic tree of life
The successful colonization of new habitats has played a fundamental role during the evolution of life. Salinity is one of the strongest barriers for...
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Combining heterogeneous subgroups with graph-structured variable selection priors for Cox regression
BackgroundImportant objectives in cancer research are the prediction of a patient’s risk based on molecular measurements such as gene expression data...
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Theoretical Performance Analysis
Theoretical performance analysis (TPA) and practical performance analysis (PPA) were introduced as “sub-disciplines” of performance analysis in the...