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DNA Isolation Long-Read Genomic Sequencing in Ctenophores
Long-read sequencing has proven the necessity for high-quality genomic assemblies of reference species, including enigmatic ctenophores. Obtaining...
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Imputation strategies for genomic prediction using nanopore sequencing
BackgroundGenomic prediction describes the use of SNP genotypes to predict complex traits and has been widely applied in humans and agricultural...
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Photoselective sequencing: microscopically guided genomic measurements with subcellular resolution
In biological systems, spatial organization and function are interconnected. Here we present photoselective sequencing, a new method for genomic and...
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Integrating genomic sequencing resources: an innovative perspective on recycling with universal Angiosperms353 probe sets
Sequencing strategies have continually advanced, with high-throughput sequencing (HTS) technologies emerging as pivotal tools in plant phylogenomics....
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Extraction of genomic DNA for sequencing from snail Helix lucorum
Genomic studies make it possible to breakthrough in many fields such as biochemistry, physiology, phylogenetics, etc., though they are unworkable...
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Long-read sequencing reveals the structural complexity of genomic integration of HPV DNA in cervical cancer cell lines
BackgroundCervical cancer (CC) causes more than 311,000 deaths annually worldwide. The integration of human papillomavirus (HPV) is a crucial genetic...
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Whole-genome sequencing reveals genomic diversity and selection signatures in **a’nan cattle
BackgroundThe crossbreeding of specialized beef cattle breeds with Chinese indigenous cattle is a common method of genetic improvement. **a’nan...
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Purification, full-length sequencing and genomic origin map** of eccDNA
Extrachromosomal circular DNA (eccDNA) was discovered more than half a century ago. However, its biogenesis and function have just begun to be...
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Single-cell RNA sequencing opens a new era for cotton genomic research and gene functional analysis
Single-cell RNA sequencing (scRNA-seq) is one of the most advanced sequencing technologies for studying transcriptome landscape at the single-cell...
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Next Generation Sequencing in Healthcare
With the fast development and broad application of next-generation sequencing (NGS) technology, data on genomic sequences is now reaching the aims of...
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Evaluating the potential of (epi)genotype-by-low pass nanopore sequencing in dairy cattle: a study on direct genomic value and methylation analysis
BackgroundGenotype-by-sequencing has been proposed as an alternative to SNP genoty** arrays in genomic selection to obtain a high density of...
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Genomic Instability
Maintenance of genome stability is vital for human health, and it is of particular importance in ageing. Genome stability is regulated by multiple...
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Whole-genome sequencing and genomic analysis of Norduz goat (Capra hircus)
Artificial and natural selective breeding of goats has resulted in many different goat breeds all around the world. Norduz goat is one of these...
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Reduced Representation Bisulfite Sequencing (RRBS)
Reduced representation bisulfite sequencing (RRBS) enriches CpG-rich genomic regions using the MspI restriction enzyme—which cuts DNA at all CCGG...
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Distinguishing Puccinia striiformis f. sp. tritici Isolates Using Genomic Sequencing: A Case Study
We are reporting on the utilization of high-throughput sequencing and different sequencing analysis tools to delineate identification of different...
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ddRAD Sequencing and DNA Barcoding
Double-digest restriction site-associated DNA sequencing is a library preparation protocol that enables capturing variable sites across the genome...
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Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens
BackgroundTo reduce the cost of genomic selection, a low-density (LD) single nucleotide polymorphism (SNP) chip can be used in combination with...
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Revolutionizing Genomics: Exploring the Potential of Next-Generation Sequencing
Next-generation sequencing (NGS) technologies have revolutionized the field of genomics by enabling high-throughput, cost-effective, and rapid DNA...
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A survey of algorithms for the detection of genomic structural variants from long-read sequencing data
As long-read sequencing technologies are becoming increasingly popular, a number of methods have been developed for the discovery and analysis of...
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