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  1. A genome-wide CRISPR screen identifies BRD4 as a regulator of cardiomyocyte differentiation

    Human induced pluripotent stem cell (hiPSC) to cardiomyocyte (CM) differentiation has reshaped approaches to studying cardiac development and...

    Arun Padmanabhan, T. Yvanka de Soysa, ... Rajan Jain in Nature Cardiovascular Research
    Article 23 February 2024
  2. A genome-wide screen reveals new regulators of the 2-cell-like cell state

    In mammals, only the zygote and blastomeres of the early embryo are totipotent. This totipotency is mirrored in vitro by mouse ‘2-cell-like cells’...

    Nikhil Gupta, Lounis Yakhou, ... Pierre-Antoine Defossez in Nature Structural & Molecular Biology
    Article 24 July 2023
  3. Genome-wide CRISPR/Cas9 screen shows that loss of GET4 increases mitochondria-endoplasmic reticulum contact sites and is neuroprotective

    Organelles form membrane contact sites between each other, allowing for the transfer of molecules and signals. Mitochondria-endoplasmic reticulum...

    Emma L. Wilson, Yizhou Yu, ... Emmanouil Metzakopian in Cell Death & Disease
    Article Open access 11 March 2024
  4. Genome-wide pooled CRISPR screening in neurospheres

    Spheroid culture systems have allowed in vitro propagation of cells unable to grow in canonical cell culturing conditions, and may capture cellular...

    Tanaz Abid, Amy B. Goodale, ... David E. Root in Nature Protocols
    Article 07 June 2023
  5. Genome-wide CRISPR screen for HSV-1 host factors reveals PAPSS1 contributes to heparan sulfate synthesis

    Herpes simplex virus type 1 (HSV-1) is a ubiquitous pathogen that causes various diseases in humans, ranging from common mucocutaneous lesions to...

    Takeshi Suzuki, Yoshitaka Sato, ... Hiroshi Kimura in Communications Biology
    Article Open access 19 July 2022
  6. A genome-wide RNAi screen for genes important for proliferation of cultured Drosophila cells at low temperature identifies the Ball/VRK protein kinase

    A change in ambient temperature is predicted to disrupt cellular homeostasis by affecting all cellular processes in an albeit non-uniform manner....

    Anna Mendaluk, Emmanuel Caussinus, ... Christian F. Lehner in Chromosoma
    Article Open access 07 February 2023
  7. Integrating genome-wide CRISPR screens and in silico drug profiling for targeted antidote development

    Numerous toxins threaten humans, but specific antidotes are unavailable for most of them. Although CRISPR screening has aided the discovery of the...

    Bei Wang, Yu Xu, ... Qiao-** Wang in Nature Protocols
    Article 30 May 2024
  8. Genome-Wide Expression Analysis of Genes Involved in Somatic Embryogenesis

    Genome-wide expression analysis is an important tool for identifying and analysing genes involved in various biological processes, including cell...
    W. Tang, R. J. Newton in Somatic Embryogenesis
    Chapter
  9. From a genome-wide screen of RNAi molecules against SARS-CoV-2 to a validated broad-spectrum and potent prophylaxis

    Expanding the arsenal of prophylactic approaches against SARS-CoV-2 is of utmost importance, specifically those strategies that are resistant to...

    Ohad Yogev, Omer Weissbrod, ... Yaniv Erlich in Communications Biology
    Article Open access 16 March 2023
  10. Genome wide CRISPR/Cas9 screen identifies the coagulation factor IX (F9) as a regulator of senescence

    During this last decade, the development of prosenescence therapies has become an attractive strategy as cellular senescence acts as a barrier...

    Paula Carpintero-Fernández, Michela Borghesan, ... Ana O’Loghlen in Cell Death & Disease
    Article Open access 19 February 2022
  11. A genome-wide screen for resilient responses in growing pigs

    Background

    There is a growing interest to decipher the genetic background of resilience and its possible improvement through selective breeding. The...

    Houda Laghouaouta, Lorenzo Fraile, ... Ramona Natacha Pena in Genetics Selection Evolution
    Article Open access 04 July 2022
  12. Identification of Genes Regulating Hepatocyte Injury by a Genome-Wide CRISPR-Cas9 Screen

    Gene editing introduces stable mutations into the genome and has powerful applications extending from research to clinical gene therapy. CRISPR-Cas9...
    Katherine Shortt, Daniel P. Heruth in Hepatocytes
    Protocol 2022
  13. Genome-wide CRISPR screening identifies a role for ARRDC3 in TRP53-mediated responses

    Whole-genome screens using CRISPR technologies are powerful tools to identify novel tumour suppressors as well as factors that impact responses of...

    John E. La Marca, Brandon J. Aubrey, ... Gemma L. Kelly in Cell Death & Differentiation
    Article Open access 14 December 2023
  14. Genome-wide CRISPR activation screen identifies candidate receptors for SARS-CoV-2 entry

    The outbreak of coronavirus disease 2019 (COVID-19) caused by SARS-CoV-2 has created a global health crisis. SARS-CoV-2 infects varieties of tissues...

    Shiyou Zhu, Ying Liu, ... Wensheng Wei in Science China Life Sciences
    Article 20 August 2021
  15. Genome-wide association study of population-standardised cognitive performance phenotypes in a rural South African community

    Cognitive function is an indicator for global physical and mental health, and cognitive impairment has been associated with poorer life outcomes and...

    Cassandra C. Soo, Jean-Tristan Brandenburg, ... Ananyo Choudhury in Communications Biology
    Article Open access 27 March 2023
  16. Genome-wide CRISPR screen identifies protein pathways modulating tau protein levels in neurons

    Aggregates of hyperphosphorylated tau protein are a pathological hallmark of more than 20 distinct neurodegenerative diseases, including Alzheimer’s...

    Carlos G. Sanchez, Christopher M. Acker, ... Fiona Elwood in Communications Biology
    Article Open access 14 June 2021
  17. Genome-Wide Prediction of Disease Resistance Gene Analogs in Flax

    Flax (Linum usitatissimum L.) is an important crop as the sources of fiber and seed oil. Annually, various pathogens cause significant loss to flax...
    **chuan Li, Frank M. You in The Flax Genome
    Chapter 2023
  18. Genome-wide CRISPR screens identify ILF3 as a mediator of mTORC1-dependent amino acid sensing

    The mechanistic target of rapamycin complex 1 (mTORC1) is an essential hub that integrates nutrient signals and coordinates metabolism to control...

    Guokai Yan, **xin Yang, ... Ying Liu in Nature Cell Biology
    Article 10 April 2023
  19. Genome-wide CRISPR screen identifies synthetic lethality between DOCK1 inhibition and metformin in liver cancer

    Metformin is currently a strong candidate anti-tumor agent in multiple cancers. However, its anti-tumor effectiveness varies among different cancers...

    Junru Feng, Hui Lu, ... Huafeng Zhang in Protein & Cell
    Article Open access 26 February 2022
  20. A dual sgRNA library design to probe genetic modifiers using genome-wide CRISPRi screens

    Map** genetic interactions is essential for determining gene function and defining novel biological pathways. We report a simple to use CRISPR...

    Alina Guna, Katharine R. Page, ... Rebecca M. Voorhees in BMC Genomics
    Article Open access 30 October 2023
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