Search
Search Results
-
Whole-genome sequences restore the original classification of dabbling ducks (genus Anas)
Anas , is a genus of dabbling ducks and encompasses a considerable number of species, among which some are the progenitors of domestic ducks. However,...
-
Family-Free Genome Comparison
The comparison of large-scale genome structures across distinct species offers valuable insights into the species’ phylogeny, genome organization,...
-
Genome Editing in Biotech Regulations Worldwide
Since the introduction of genome editing techniques in breeding and the first commercial products on the market, various governments or jurisdictions...
-
Comparative Genome Annotation
Newly sequenced genomes are being added to the tree of life at an unprecedented fast pace. A large proportion of such new genomes are...
-
Technologies Promoting Genome-Based Taxonomy
Whole-genome sequencing (WGS) has proven to be a reliable method. Additionally, it is a commonly used approach in research and surveillance...
-
Genome evolution: Lessons from Genolevures
In the past years, yeast genome-sequencing programs have been widely developed. Two of them, namely Genolevures I and II, were devoted to the...
-
Crucifer’s Pathogens Genome
The information on genome sequences, analysis and assembly of limited pathogens of crucifers has been generated and made available. It has given...
-
-
New proposal of viral genome representation applied in the classification of SARS-CoV-2 with deep learning
BackgroundIn December 2019, the first case of COVID-19 was described in Wuhan, China, and by July 2022, there were already 540 million confirmed...
-
Genome-based classification of the family Haloferacaceae and description of five novel species of Halobaculum
The taxonomic status of some species of Halobellus , Haloferax , Halogranum , and Haloplanus within the family Haloferacaceae was elucidated by...
-
The complete chloroplast genome sequence of Artemisia stechmanniana (Asteraceae): genome structure and phylogenetic analysis
Artemisia stechmanniana , also known as A. sacrorum , belongs to Artemisia in Asteraceae family. A. stechmanniana is also a traditional Chinese folk...
-
Structural and Functional Annotation of the Wheat Genome
Wheat genome sequencing has passed through major steps in a decade, starting from the sequencing of large contiguous sequences obtained from...
-
Caveats for Watermelon Whole Genome Sequencing
Watermelon is a highly important vegetable crop species worldwide, with its abundance of genetic resources aiding in identifying mechanisms and...
-
Genome-based classification of genera Halosegnis and Salella, and description of four novel halophilic archaea isolated from a tidal flat
The current species of Halosegnis and Salella within the class Halobacteria are closely related based on phylogenetic, phylogenomic, and comparative...
-
Sequence-Based Classification and Identification
You will be introduced to the classification of prokaryotes from species to the higher levels of class and phyla. You will learn that the 16S rRNA...
-
Analyses of Nuclear Reads Obtained Using Genome Skimming
In this protocol paper, we review a set of methods developed in recent years for analyzing nuclear reads obtained from genome skimming. As the cost...
-
Genome-wide identification, phylogenetic classification of histone acetyltransferase genes, and their expression analysis in sugar beet (Beta vulgaris L.) under salt stress
Main conclusionThis study identified seven histone acetyltransferase-encoding genes ( HAT s) from Beta vulgaris L. (sugar beet) genome through...
-
Complete genome sequence analysis and genome organization of Dasychira pudibunda nucleopolyhedrovirus (DapuNPV-T1) from Turkey
The economically important pale tussock moth Dasychira pudibunda L. (Lepidoptera: Lymantriidae), known as a beech pest in Europe, primarily inflicts...
-
The complete chloroplast genome sequences of three lilies: genome structure, comparative genomic and phylogenetic analyses
We sequenced and analyzed the complete chloroplast genomes of Lilium amoenum , Lilium souliei , and Nomocharis forrestii in detail, including the first...
-
Centrifuger: lossless compression of microbial genomes for efficient and accurate metagenomic sequence classification
Centrifuger is an efficient taxonomic classification method that compares sequencing reads against a microbial genome database. In Centrifuger, the...
