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  1. Biclustering for Epi-Transcriptomic Co-functional Analysis

    Dynamic and reversible N6-methyladenosine (m6A) modifications are associated with many essential cellular functions as well as physiological and...
    Shutao Chen, Lin Zhang, Hui Liu in RNA Amplification and Analysis
    Protocol 2024
  2. Expression and Functional Analysis of Ctenophore Glutamate Receptor Genes

    The functional analysis of ctenophore neurotransmitter receptors, transporters, and ion channels can be greatly simplified by use of heterologous...
    Mark L. Mayer in Ctenophores
    Protocol 2024
  3. Purification, Reconstitution, and Functional Analysis of Connexin Hemichannels

    Connexins are the proteins that form the gap junction channels that are essential for cell-to-cell communication. These channels are formed by...
    Mariana C. Fiori, Guillermo A. Altenberg in Connexin Hemichannels
    Protocol 2024
  4. Functional principal component analysis for incomplete space–time data

    Environmental signals, acquired, e.g., by remote sensing, often present large gaps of missing observations in space and time. In this work, we...

    Alessandro Palummo, Eleonora Arnone, ... Laura M. Sangalli in Environmental and Ecological Statistics
    Article Open access 16 March 2024
  5. Computational Tools for Functional Analysis of Circular RNAs

    The development of high-throughput total RNA sequencing technologies and novel computational tools have discovered the ubiquitous expression of...
    Tanvi Sinha, Sharmishtha Shyamal, Amaresh C. Panda in RNA Structure and Function
    Chapter 2023
  6. A global functional analysis of fish-estuary associations and selected environmental factors

    A global analysis of the functional characteristics of meta-assemblages of estuary-associated fishes was undertaken at the marine ecoregion level....

    Trevor D. Harrison, Alan K. Whitfield in Reviews in Fish Biology and Fisheries
    Article 03 April 2024
  7. Linking structural and functional changes during aging using multilayer brain network analysis

    Brain structure and function are intimately linked, however this association remains poorly understood and the complexity of this relationship has...

    Gwendolyn Jauny, Mite Mijalkov, ... Thomas Hinault in Communications Biology
    Article Open access 28 February 2024
  8. Functional Analysis of Chloroplast Iron Uptake and Homeostasis

    Iron has a crucial role in plastid biology. Iron is a required cofactor for the operation of the photosynthetic functions and other metabolic...
    Helga Zelenyánszki, Ádám Solti in Plant Iron Homeostasis
    Protocol 2023
  9. ASAP: a platform for gene functional analysis in Angelica sinensis

    Background

    Angelica sinensis (Danggui), a renowned medicinal orchid, has gained significant recognition for its therapeutic effects in treating a...

    Silan Wu, Lingling Da, ... Jiaotong Yang in BMC Genomics
    Article Open access 23 January 2024
  10. Multi-omics analysis of functional substances and expression verification in cashmere fineness

    Background

    Numerous factors influence the growth and development of cashmere. Existing research on cashmere has predominantly emphasized a single...

    Yanan Xu, Yu Zhang, ... Zeying Wang in BMC Genomics
    Article Open access 28 November 2023
  11. Functional Enrichment Analysis Identifying Regulatory Information Associated with Human Fracture

    Dozens of loci associated with fracture have been identified by genome-wide association studies (GWASs). However, most of these variants are located...

    **ang-He Meng, Zhen Liu, ... Zeng-Hui Mao in Calcified Tissue International
    Article 21 July 2023
  12. DhuFAP: a platform for gene functional analysis in Dendrobium huoshanense

    Background

    Dendrobium huoshanense , a traditional medicinal and food plant, has a rich history of use. Recently, its genome was decoded, offering...

    Qiaoqiao **ao, Qi Pan, ... Jiaotong Yang in BMC Genomics
    Article Open access 04 April 2024
  13. Functional Genomics and Network Biology

    Functional genomics and network biology have emerged as interdisciplinary fields that provide a comprehensive understanding of biological systems....
    Amit Joshi, Ajay Kumar, Vikas Kaushik in Advances in Bioinformatics
    Chapter 2024
  14. Functional analysis of recurrent CDC20 promoter variants in human melanoma

    Small nucleotide variants in non-coding regions of the genome can alter transcriptional regulation, leading to changes in gene expression which can...

    Paula M. Godoy, Abimbola Oyedeji, ... Charles K. Kaufman in Communications Biology
    Article Open access 29 November 2023
  15. Isolation of Mitochondria from Mouse Tissues for Functional Analysis

    Methods for isolating mitochondria from different rodent tissues have been established for decades. Although the general principles for crude...
    Rebeca Acín-Pérez, Katrina P. Montales, ... Ajit S. Divakaruni in Metabolic Reprogramming
    Protocol 2023
  16. Functional annotation and meta-analysis of maize transcriptomes reveal genes involved in biotic and abiotic stress

    Background

    Environmental stress factors, such as biotic and abiotic stress, are becoming more common due to climate variability, significantly...

    Rita K Hayford, Olivia C Haley, ... Margaret R Woodhouse in BMC Genomics
    Article Open access 30 May 2024
  17. Employing protein size in the functional analysis of orthologous proteins, as illustrated with the yeast HOG pathway

    Comparative genomics has provided us with a new handle on the interpretation of protein sequences. The sequencing of numerous fungal genomes has...
    Marcus Krantz, Stefan Hohmann in Comparative Genomics
    Chapter
  18. Genome-wide identification of thaumatin-like protein family in pear and functional analysis their roles in pollen growth

    Thaumatin-like proteins (TLPs) are crucial for plant growth and development. However, the function of TLPs in pear pollen tube growth has not been...

    Hao Zhang, Xueying Liu, ... Peng Wang in Plant Growth Regulation
    Article 29 May 2024
  19. vissE: a versatile tool to identify and visualise higher-order molecular phenotypes from functional enrichment analysis

    Functional analysis of high throughput experiments using pathway analysis is now ubiquitous. Though powerful, these methods often produce thousands...

    Dharmesh D. Bhuva, Chin Wee Tan, ... Melissa J. Davis in BMC Bioinformatics
    Article Open access 08 February 2024
  20. Differentiation of Speech and Language Functional Systems and Analysis of the Differences in Related Neural Networks

    Abstract

    This paper explores the problem of differentiation of human speech and language systems. On the basis of contemporary perspectives in speech...

    I. G. Malanchuk, V. A. Orlov, ... D. G. Malakhov in Human Physiology
    Article 23 June 2023
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