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  1. Insights into the enumeration of mixtures of probiotic bacteria by flow cytometry

    The use of flow cytometry to enumerate microorganisms is gaining traction over the traditional plate count technique on the basis of superior...

    Harry Tracey, Niall Coates, ... Susan Frances Plummer in BMC Microbiology
    Article Open access 27 February 2023
  2. Enumeration of Bacteriophages by Plaque Assay

    Enumeration of bacteriophages by plaque assay requires the mixing of host-specific bacteria with a lytic bacteriophage of interest in a soft agar...
    Diana Elizabeth Waturangi in Bacteriophages
    Protocol 2024
  3. Isolation and Enumeration of Mycophagous Protist

    Protists can prey upon other smaller organisms such as bacteria and fungi. Their feeding actions are of utmost importance in driving the microbial...
    Amol D. Theng, Bhavana V. Mohite, Satish V. Patil in Practical Handbook on Soil Protists
    Protocol 2024
  4. EFMlrs: a Python package for elementary flux mode enumeration via lexicographic reverse search

    Background

    Elementary flux mode (EFM) analysis is a well-established, yet computationally challenging approach to characterize metabolic networks....

    Bianca A Buchner, Jürgen Zanghellini in BMC Bioinformatics
    Article Open access 10 November 2021
  5. Simultaneous isolation and enumeration of virulent Vibrio cholerae and Vibrio vulnificus using an advanced MPN-PCR method

    Vibrio cholerae and Vibrio vulnificus are critical foodborne pathogens that need to be intensively controlled for their infection due to the intake...

    Jae-Hwa Lee, Seul-Ki Park, ... Young-Mog Kim in Archives of Microbiology
    Article 06 December 2021
  6. All galls are divided into three or more parts: recursive enumeration of labeled histories for galled trees

    Objective

    In mathematical phylogenetics, a labeled rooted binary tree topology can possess any of a number of labeled histories, each of which...

    Shaili Mathur, Noah A. Rosenberg in Algorithms for Molecular Biology
    Article Open access 13 February 2023
  7. Enumeration of Testate Amoeba Through Direct Count from Soil

    Several methods have been used to extract testate amoebae from various ecological niche to examine and quantify their tests using light microscopy....
    Komal A. Chandarana, Hetvi Naik, Natarajan Amaresan in Practical Handbook on Soil Protists
    Protocol 2024
  8. Observation and Enumeration of Molds from Spoiled Bread

    We will introduce the basic knowledge of molds from spoiled food. We will practice staining molds and observe their morphology. We will enumerate the...
    Chapter 2023
  9. Advances in AMF Research: Isolation, Histochemical Staining, Enumeration, Morphological and Molecular Techniques

    The mutualistic association of arbuscular mycorrhizal fungi (AMF) is an important symbiotic association between the roots of plant and fungi that...
    Chapter 2024
  10. Enumeration and Identification of Staphylococcus aureus in Chicken Salads

    We will practice enumerating Staphylococcus aureus in chicken salads by inoculating, dilution technique, and spread plating onto selective medium....
    Chapter 2023
  11. Enumeration and comprehensive in-silico modeling of three-helix bundle structures composed of typical αα-hairpins

    Background

    The design of protein structures from scratch requires special attention to the combination of the types and lengths of the secondary...

    Koya Sakuma, Shintaro Minami in BMC Bioinformatics
    Article Open access 27 September 2021
  12. Enumeration and Identification of Listeria monocytogenes on Ready-to-Eat (RTE) Frankfurters

    We will practice enumerating Listeria monocytogenes on commercial frankfurters by inoculating, dilution technique, and spread plating onto selective...
    Chapter 2023
  13. Enumeration of Rhizobia: Most-Probable-Number (MPN) Technique

    Rhizobial diversity and abundance varies with different agroecosystems depending on its physicochemical properties. Since oxygen is one of the key...
    M. Senthilkumar, N. Amaresan, A. Sankaranarayanan in Plant-Microbe Interactions
    Protocol 2021
  14. Comparison of BCYEα+AB agar and MWY agar for detection and enumeration of Legionella spp. in hospital water samples

    Background

    This study illustrates for the first time the performance (sensitivity and selectivity) of the selective medium BCYEα +AB suggested by the...

    Savina Ditommaso, Monica Giacomuzzi, ... Carla M. Zotti in BMC Microbiology
    Article Open access 16 February 2021
  15. Enumeration of Aerobic Plate Counts, Coliforms, and Escherichia coli of Organic Fruit Juice on Petrifilm

    We will practice using Petrifilm to enumerate food microbial quality index, including aerobic plate counts, coliform, and E. coli from organic fruit...
    Chapter 2023
  16. Most Probable Number (MPN) Method for Enumeration of Soil Protists

    The most probable number (MPN) technique has been widely used to enumerate environmental microorganisms, including soil protists. This...
    Protocol 2024
  17. Impact of multi-strain probiotic, citric acid, garlic powder or their combinations on performance, ileal histomorphometry, microbial enumeration and humoral immunity of broiler chickens

    Heat stress, one of the critical obstacles to poultry sector in subtropical and tropical countries, reduces performance, immune response, and animal...

    Ahmed M. Elbaz, Nashaat S. Ibrahim, ... Abdel-Moneim Eid Abdel-Moneim in Tropical Animal Health and Production
    Article 12 January 2021
  18. Azospirillum brasilense viable cells enumeration using propidium monoazide-quantitative PCR

    Azospirillum brasilense is a plant growth promoting bacteria used as an inoculant in diverse crops. Accurate analytical methods are required to...

    Elisandra Triches da Cunha, Ana Marina Pedrolo, ... Ana Carolina Maisonnave Arisi in Archives of Microbiology
    Article 09 April 2020
  19. A novel and improved selective media for the isolation and enumeration of Klebsiella species

    Abstract

    Bacterial pathogens are fostered in and transmitted through wastewater. Hence, monitoring their impact on sanitation and hygiene is...

    Megha Prasad, Sindhu K. Shetty, ... Ajith Madhavan in Applied Microbiology and Biotechnology
    Article Open access 16 November 2022
  20. Effects of AGXT2 variants on blood pressure and blood sugar among 750 older Japanese subjects recruited by the complete enumeration survey method

    Background

    Alanine:glyoxylate aminotransferase 2 (AGXT2; EC 2.6.1.44) is the only enzyme that degrades the R-form of 3-aminoisobutyrate, an...

    Yuta Yoshino, Hiroshi Kumon, ... Shu-ichi Ueno in BMC Genomics
    Article Open access 20 April 2021
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