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Draft assembly and annotation of the Cuban crocodile (Crocodylus rhombifer) genome
ObjectivesThe new data provide an important genomic resource for the Critically Endangered Cuban crocodile ( Crocodylus rhombifer ). Cuban crocodiles...
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A combined de novo assembly approach increases the quality of prokaryotic draft genomes
Next-generation sequencing methods provide comprehensive data for the analysis of structural and functional analysis of the genome. The draft genomes...
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The Utilization of Reference-Guided Assembly and In Silico Libraries Improves the Draft Genome of Clarias batrachus and Culter alburnus
Long-read sequencing technologies can generate highly contiguous genome assemblies compared to short-read methods. However, their higher cost often...
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A draft genome assembly of “Cas” (Psidium friedrichsthalianum (O. Berg) Nied.): an indigenous crop of Costa Rica untapped
Psidium friedrichsthalianum (O. Berg) Nied. is a tropical tree species in the Myrtaceae family, natively distributed from southern Mexico to eastern...
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Constructing telomere-to-telomere diploid genome by polishing haploid nanopore-based assembly
Draft genomes generated from Oxford Nanopore Technologies (ONT) long reads are known to have a higher error rate. Although existing genome polishers...
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Unveiling Agricultural Biotechnological Prospects: The Draft Genome Sequence of Stenotrophomonas geniculata LGMB417
Stenotrophomonas species are recognized as rhizobacteria that play a pivotal role in promoting plant growth by making substantial contributions to...
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Comparison of assembly platforms for the assembly of the nuclear genome of Trichoderma harzianum strain PAR3
BackgroundTrichoderma is a diverse genus of fungi that includes several species that possess biotechnological and agricultural applications,...
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ONT read assembly of the black rhino genome
ObjectivesThe black rhinoceros ( Diceros bicornis ) is an endangered mammal for which a captive breeding program is part of the conservation effort....
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The draft genome reveals early duplication event in Pterocarpus santalinus: an endemic timber species
Main conclusionA 541 Mb draft genome of
Pterocarpus santalinus is presented and evidence of whole-genome duplication in the Eocene period with...
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Draft genome of the aardaker (Lathyrus tuberosus L.), a tuberous legume
ObjectivesLathyrus tuberosus is a nitrogen-fixing member of the Fabaceae which forms protein-rich tubers. To aid future domestication programs for...
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A chromosome-level genome assembly reveals genomic characteristics of the American mink (Neogale vison)
Availability of a contiguous chromosome-level genome assembly is the foundational step to develop genome-based studies in American mink ( Neogale vison ...
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Draft genome and SSR data mining of a Peruvian landrace of Capsicum chinense, the arnaucho chili pepper
The Arnaucho chili pepper (ACP) is a traditional vegetable used in Peru because of its gastronomic properties. Due to its importance in the Peruvian...
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The draft genome of Nitzschia closterium f. minutissima and transcriptome analysis reveals novel insights into diatom biosilicification
BackgroundNitzschia closterium f. minutissima is a commonly available diatom that plays important roles in marine aquaculture. It was originally...
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Draft Genome Sequence of a Primate Isolate of Kazachstania pintolopesii
Kazachstania pintolopesii is an opportunistic mammalian pathobiont from the K. telluris species complex. No draft genomes of this species are...
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Draft genome sequence of novel Candidatus Ornithobacterium hominis carrying antimicrobial resistance genes in Egypt
BackgroundCandidatus Ornithobacterium hominis ( O. hominis ), which was identified in nasopharyngeal swabs from Egypt, has been associated with...
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Draft Genome Sequence of Candida saopaulonensis from a Very Premature Infant with Sepsis
The rare fungus Candida saopaulonensis has never been reported to be associated with human infection. We report the draft genome sequence of the...
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Chromosome-length genome assembly of Teladorsagia circumcincta – a globally important helminth parasite in livestock
BackgroundGastrointestinal (GIT) helminthiasis is a global problem that affects livestock health, especially in small ruminants. One of the major...
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Draft Genome Sequence of the Rhinocladiella similis Clinical Isolate CBS 149759
Rhinocladiella simili s is a melanized fungi involved in chromoblastomycosis. R. similis genome has never been sequenced, therefore we propose the...
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Twinkle twinkle brittle star: the draft genome of Ophioderma brevispinum (Echinodermata: Ophiuroidea) as a resource for regeneration research
BackgroundEchinoderms are established models in experimental and developmental biology, however genomic resources are still lacking for many species....
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Draft genome sequence of lysogenic Pseudomonas sp. strain VB3 isolated from Vashisht hot spring, India
Bacterial strain VB3, an aerobic bacterium, was isolated from the water of Vashisht hot spring, Himachal Pradesh, India. The lysogenic bacterial...
