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  1. Denaturing Gradient Gel Electrophoresis (DGGE) Analysis of the Fungi Involved in Biodegradation

    Tracing fungal communities through denaturing gradient gel electrophoresis (DGGE) is an incredibly affordable, exploratory, and qualitative molecular...
    Saurabh Kumar, Divya Joshi, ... Reeta Goel in Mycoremediation Protocols
    Protocol 2022
  2. Methylation-Specific Electrophoresis

    Methylation of CpG sites in the promoter region of genomic DNA is an important epigenetic modification that plays a critical role in gene regulation,...
    Seiya Yokoyama, Kei Matsuo, Akihide Tanimoto in Mucins
    Protocol 2024
  3. Polyacrylamide Gel Electrophoresis

    Polyacrylamide Gel Electrophoresis is based on the principle of migration of charged particles under the influence of electric field to separate out...
    Kamal Gandhi, Neelima Sharma, ... Vanita Pandey in Advanced Analytical Techniques in Dairy Chemistry
    Protocol 2022
  4. Denaturing Gradient Gel Electrophoresis (DGGE) to Estimate Fungal Diversity

    Assessments of fungal communities based on spores released from decaying leaves miss non-sporulating mycelia. Molecular approaches circumvent this...
    Liliya G. Nikolcheva, Felix Bärlocher in Methods to Study Litter Decomposition
    Chapter 2020
  5. Denaturing gradient gel electrophoresis and multi-SIR profiles of soil microbial communities from a karst doline at Aggtelek National Park, Hungary

    Soils play an important role in the ecosystem of karstic landscapes both as a buffer zone and as a source of acidity to belowground water. Although...

    Márton Mucsi, Gergely Krett, ... Andrea K. Borsodi in Folia Microbiologica
    Article Open access 08 October 2020
  6. Electrophoresis, a transport technology that transitioned from moving boundary method to zone method

    Gel electrophoresis, a transport technology, is one of the most widely used experimental methods in biochemical and pharmaceutical research and...

    Tsutomu Arakawa, Masataka Nakagawa, ... Teruo Akuta in European Biophysics Journal
    Article 30 December 2023
  7. Use of PCR-DGGE-Based Molecular Methods to Analyze Nematode Community Diversity

    DGGE (denaturing gradient gel electrophoresis) is a nucleic acid separation technique applied to the evaluation of microbial biodiversity. This...
    Margherita Festa, Pamela Abbruscato, Barbara Manachini in Plant-Nematode Interactions
    Protocol 2024
  8. Plant-Nematode Interactions

    This volume explores the latest advancements and techniques used by researchers to work with plant parasitic nematodes (PPNs) and to study their...
    Sergio Molinari in Methods in Molecular Biology
    Book 2024
  9. In-Gel Cyanoethylation for Pseudouridines Mass Spectrometry Detection of Bacterial Regulatory RNA

    Regulatory RNAs, as well as many RNA families, contain chemically modified nucleotides, including pseudouridines (ψ). To map nucleotide...
    Antony Lechner, Philippe Wolff in Bacterial Regulatory RNA
    Protocol 2024
  10. Sucrose Gradient Analysis of Human Mitochondrial Ribosomes and RNA

    Faithful expression of the mitochondrial genome is required for the synthesis of the oxidative phosphorylation complexes and cell fitness. In humans,...
    Kah Ying Ng, Brendan J. Battersby in The Mitoribosome
    Protocol 2023
  11. Rapid Genoty** of Campylobacter coli Strains from Poultry Meat by PFGE, Sau-PCR, and fla-DGGE

    The genoty** of Campylobacter coli was done using three methods, pulsed-field gel electrophoresis (PFGE), Sau-polymerase chain reaction (Sau-PCR),...

    Ge-Feng Yao, Yi-Lin Hu, ... Shui-Lian Bi in Current Microbiology
    Article 06 November 2023
  12. Uncultivable Soil Microbes Contributing to Sustainable Agriculture

    The science of microbial genomics and metagenomics is necessary to understand the complete microbial composition in soil, water, and other...
    Manish Kumar, Neha Sharma, ... R. S. Tomar in Rhizosphere Microbes
    Chapter 2022
  13. Reveal of Gut Microbiota of Nymphs Ameletus inopinatus (Eaton), 1887 (Ephemeroptera: Ameletidae) with Molecular and Microbiological Analyzes

    Abstract

    Mayflies, recognized for their hemimetabolous life cycle and ephemeral adult phase, exhibit diverse larval forms categorized as burrowing,...

    N. Ertorun, M. B. Mutlu in Biology Bulletin
    Article 31 May 2024
  14. Use of Native-PAGE for the Identification of Epichaperomes in Cell Lines

    Epichaperomes are disease-associated pathologic scaffolds, composed of tightly bound chaperones, co-chaperones, and other factors. They mediate...
    Tanaya Roychowdhury, Anand R. Santhaseela, ... Gabriela Chiosis in Chaperones
    Protocol 2023
  15. Molecular Tools for Monitoring and Validating Bioremediation

    BioremediationBioremediation may be defined as the mechanism by which a biological agent (e.g., microbesMicrobes, fungiFungi, plants, and...
    Chapter 2022
  16. Detection of SARS-CoV-2 spike protein D614G mutation using μTGGE

    Background

    The accurate and expeditious detection of SARS-CoV-2 mutations is critical for monitoring viral evolution, assessing its impact on...

    Kevin Maafu Juma, Kenta Morimoto, ... Kiyoshi Yasukawa in Molecular Biology Reports
    Article 08 February 2024
  17. In Vitro Assay to Measure APE1 Enzymatic Activity on Ribose Monophosphate Abasic Site

    APE1 (apurinic/apyrimidinic endodeoxyribonuclease 1) is a central enzyme of the base excision repair (BERBase excision repair (BER)) pathway playing...
    Matilde Clarissa Malfatti, Giulia Antoniali, Gianluca Tell in Base Excision Repair Pathway
    Protocol 2023
  18. Bacteria consortia enhanced hydrocarbon degradation of waxy crude oil

    Waxy crude oil is a problem to the oil and gas industry because wax deposition in pipelines reduces the quality of the crude oil. Currently, the...

    Raja Noor Zaliha Raja Abd Rahman, Wahhida Latip, ... Mohd Shukuri Mohamad Ali in Archives of Microbiology
    Article 12 November 2022
  19. Analysis of the bacterial diversity in Moroccan Jben cheese using TTGE, DGGE, and 16S rRNA sequencing

    This research investigated the physicochemical, microbiological, and bacterial diversity of Jben cheese, a popular artisanal variety in Morocco. The...

    Safae Azzouz, Soumaya Ahadaf, ... Amin Laglaoui in World Journal of Microbiology and Biotechnology
    Article 09 April 2024
  20. Oxidized Low-Density Lipoprotein: Preparation, Validation, and Use in Cell Models

    Lipoproteins in plasma are constituted by the least dense chylomicron, very-low-density lipoprotein (VLDL), low-density lipoprotein (LDL), and...
    Narayanasamy Angayarkanni, Kannadasan Anand Babu in Lipid Signalling
    Protocol 2024
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