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  1. Targeted genome editing with a DNA-dependent DNA polymerase and exogenous DNA-containing templates

    Reverse transcriptases, used in prime editing systems, exhibit lower fidelity, processivity and dNTP affinity than many DNA-dependent DNA...

    Bin Liu, **aolong Dong, ... Erik J. Sontheimer in Nature Biotechnology
    Article 14 September 2023
  2. Regulation of Human DNA Primase-Polymerase PrimPol

    Abstract

    Transmission of genetic information depends on successful completion of DNA replication. Genomic DNA is subjected to damage on a daily basis....

    Elizaveta O. Boldinova, Alena V. Makarova in Biochemistry (Moscow)
    Article 17 August 2023
  3. Non-Catalytic Domains of DNA Polymerase λ: Influence on Enzyme Activity and Its Regulation

    Abstract

    DNA polymerase λ (Polλ) belongs to the same structural X-family as DNA polymerase β, the main polymerase of base excision repair. The role of...

    E. A. Maltseva, N. I. Rechkunova, O. I. Lavrik in Doklady Biochemistry and Biophysics
    Article Open access 01 October 2023
  4. A mechanistic model of primer synthesis from catalytic structures of DNA polymerase α–primase

    The mechanism by which polymerase α–primase (polα–primase) synthesizes chimeric RNA-DNA primers of defined length and composition, necessary for...

    Elwood A. Mullins, Lauren E. Salay, ... Brandt F. Eichman in Nature Structural & Molecular Biology
    Article 15 March 2024
  5. An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications

    Abstract

    Loop-mediated isothermal amplification (LAMP) is a widely used method for clinical diagnosis, customs quarantine, and disease prevention....

    Jiaxuan Li, Yang Li, ... Jufang Wang in Applied Microbiology and Biotechnology
    Article 06 September 2023
  6. Influence of Nucleotide Context on Non-Specific Amplification of DNA with Bst exo DNA Polymerase

    Abstract

    Isothermal nucleic acids amplification that requires DNA polymerases with strand-displacement activity gained more attention in the last two...

    Ravil R. Garafutdinov, Olga Yu. Kupova, Assol R. Sakhabutdinova in Biochemistry (Moscow)
    Article 01 January 2024
  7. Telomere C-Strand Fill-In Machinery: New Insights into the Human CST-DNA Polymerase Alpha-Primase Structures and Functions

    Telomeres at the end of eukaryotic chromosomes are extended by a specialized set of enzymes and telomere-associated proteins, collectively termed...
    Chapter 2024
  8. Abundant and cosmopolitan lineage of cyanopodoviruses lacking a DNA polymerase gene

    Cyanopodoviruses affect the mortality and population dynamics of the unicellular picocyanobacteria Prochlorococcus and Synechococcus , the dominant...

    Lanlan Cai, Yue Chen, ... Qinglu Zeng in The ISME Journal
    Article Open access 10 November 2022
  9. When push comes to shove - RNA polymerase and DNA-bound protein roadblocks

    In recent years, transcriptional roadblocking has emerged as a crucial regulatory mechanism in gene expression, whereby other DNA-bound obstacles can...

    Nan Hao, Alana J. Donnelly, ... Keith E. Shearwin in Biophysical Reviews
    Article Open access 10 June 2023
  10. Customized multiple sequence alignment as an effective strategy to improve performance of Taq DNA polymerase

    Abstract

    Engineering Taq DNA polymerase ( Taq Pol) for improved activity, stability and sensitivity was critical for its wide applications. Multiple...

    **njia Li, Binbin Chen, ... Haoran Yu in Applied Microbiology and Biotechnology
    Article 01 September 2023
  11. Impeding DNA Polymerase β Activity by Oleic Acid to Inhibit Base Excision Repair and Induce Mitochondrial Dysfunction in Hepatic Cells

    Free fatty acids (FFAs) hepatic accumulation and the resulting oxidative stress contribute to several chronic liver diseases including nonalcoholic...

    Meina Wang, Yannan Qi, ... Zhigang Hu in Cell Biochemistry and Biophysics
    Article 11 September 2023
  12. Repurposing FDA approved drugs against monkeypox virus DNA dependent RNA polymerase: virtual screening, normal mode analysis and molecular dynamics simulation studies

    Zoonotic monkeypox disease, caused by the double-stranded DNA monkeypox virus, has become a global concern. Due to the absence of a specific small...

    Ahmad Abdul Salam Khan, Muhammad Abrar Yousaf, ... Ruqia Bibi in VirusDisease
    Article 11 June 2024
  13. Detection and characterization of constitutive replication origins defined by DNA polymerase epsilon

    Background

    Despite the process of DNA replication being mechanistically highly conserved, the location of origins of replication (ORI) may vary from...

    Roman Jaksik, David A. Wheeler, Marek Kimmel in BMC Biology
    Article Open access 24 February 2023
  14. Directed evolution and selection of biostable l-DNA aptamers with a mirror-image DNA polymerase

    Mirror-image aptamers made from chirally inverted nucleic acids are nuclease-resistant and exceptionally biostable, opening up opportunities for...

    Ji Chen, Mengyin Chen, Ting F. Zhu in Nature Biotechnology
    Article Open access 06 June 2022
  15. In vivo inhibition of the Ostreid Herpesvirus-1 (OsHV-1) replication in juveniles of the Pacific oyster Crassostrea gigas by a specific RNAi targeting the viral DNA polymerase gene

    The global industrial farming of the Pacific oyster ( Crassostrea gigas ) has faced significant losses in production and a major negative social impact...

    Carolina Gallardo-Ybarra, Arturo Sánchez-Paz, ... Enrique De La Re Vega in Aquaculture International
    Article 23 October 2023
  16. DNA polymerase iota promotes EMT and metastasis of esophageal squamous cell carcinoma by interacting with USP7 to stabilize HIF-1α

    Esophageal squamous cell carcinoma (ESCC) is one of the most lethal cancer types, with a low 5-year survival rate of ~20%. Our prior research has...

    Aidi Gao, Mingxia Zhang, ... Yuandong Cao in Cell Death & Disease
    Article Open access 24 February 2024
  17. The P286R mutation of DNA polymerase ε activates cancer-cell-intrinsic immunity and suppresses endometrial tumorigenesis via the cGAS-STING pathway

    Endometrial carcinoma (EC) is a prevalent gynecological tumor in women, and its treatment and prevention are significant global health concerns. The...

    Ming Tang, Shasha Yin, ... Guofang Chen in Cell Death & Disease
    Article Open access 18 January 2024
  18. DNA polymerase beta connects tumorigenicity with the circadian clock in liver cancer through the epigenetic demethylation of Per1

    The circadian-controlled DNA repair exhibits a strong diurnal rhythm. Disruption in circadian clock and DNA repair is closely linked with...

    Siyu Chen, Wenxiang Zhang, ... Chang Liu in Cell Death & Disease
    Article Open access 20 January 2024
  19. Molecular evolution steered structural adaptations in the DNA polymerase III α subunit of halophilic bacterium Salinibacter ruber

    A significant portion of the earth has a salty environment, and the literature on bacterial survival mechanisms in salty environments is limited....

    Aveepsa Sengupta, Kunwali Das, ... Ashutosh Kumar in Extremophiles
    Article 23 July 2023
  20. Inhibition of Monkeypox Virus DNA Polymerase Using Moringa oleifera Phytochemicals: Computational Studies of Drug-Likeness, Molecular Docking, Molecular Dynamics Simulation and Density Functional Theory

    The emergence of zoonotic monkeypox (MPX) disease, caused by the double-stranded DNA monkeypox virus (MPXV), has become a global threat. Due to...

    Muhammad Abrar Yousaf, Shefin Basheera, Sreekumar Sivanandan in Indian Journal of Microbiology
    Article 28 March 2024
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