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  1. Characterization of Seed Mycobiota Using Culture-Dependent and Culture-Independent Approaches

    Seed fungi are potentially important for their roles in seedling microbiome assembly and seedling health, but surveys of full seed fungal communities...
    Gillian E. Bergmann, Sabrina J. Heitmann, ... Johan H. J. Leveau in Microbial Environmental Genomics (MEG)
    Protocol 2023
  2. Microbial Community of an 11th Century Manuscript by Both Culture-Dependent and -Independent Approaches

    Abstract

    In this study, the microbial community ( Bacteria, Archaea, and Fungi ) of a historical manuscript was investigated by microscopic observation...

    N. Raeisnia, E. Arefian, M. A. Amoozegar in Microbiology
    Article 03 June 2022
  3. Isolation and characterization of novel potassium-solubilizing purple nonsulfur bacteria from acidic paddy soils using culture-dependent and culture-independent techniques

    The current research as aimed (i) to isolate and select the purple nonsulfur bacteria (PNSB) possessing the potassium-solubilizing ability from acid...

    Nguyen Quoc Khuong, Jakkapan Sakpirom, ... Ly Ngoc Thanh Xuan in Brazilian Journal of Microbiology
    Article 28 July 2023
  4. Bacterial Diversity in a Sri Lankan Geothermal Spring Assessed by Culture-Dependent and Culture-Independent Approaches

    Hot springs harbour diverse and interesting groups of microorganisms adapted to extreme conditions. However, due to limitations in the...

    Supun N. Samarasinghe, Rasika P. Wanigatunge, Dhammika N. Magana-Arachchi in Current Microbiology
    Article 13 July 2021
  5. Bacterial diversity of an acid mine drainage beside the **chú River (Mexico) accessed by culture-dependent and culture-independent approaches

    **chú River is a Mexican river located in an environmental preservation area called Sierra Gorda Biosphere Reserve. Around it, there are tons of...

    Elcia Margareth Souza Brito, Rémy Guyoneaud, ... Agnès Hirschler-Réa in Extremophiles
    Article 17 February 2023
  6. Culture-dependent screening of endospore-forming clostridia in infant feces

    Background

    Only a few studies dealt with the occurrence of endospore-forming clostridia in the microbiota of infants without obvious health...

    Eugenio Ingribelli, Nikol Modrackova, ... Vera Neuzil-Bunesova in BMC Microbiology
    Article Open access 17 November 2023
  7. Metagenomic and culture-dependent approaches unveil active microbial community and novel functional genes involved in arsenic mobilization and detoxification in groundwater

    Background

    Arsenic (As) and its species are major pollutants in ecological bodied including groundwater in Bangladesh rendering serious public health...

    Farzana Diba, M. Nazmul Hoque, ... Munawar Sultana in BMC Microbiology
    Article Open access 30 August 2023
  8. Culture-dependent and culture-independent characterization of bacterial community diversity in different types of sandy lands: the case of Minqin County, China

    Background

    Minqin is suffering from a serious desertification, whereas the knowledge about its bacterial community is limited. Herein, based on Nitrari...

    Yali Wei, Fang Wang, ... Hongmei Sheng in BMC Microbiology
    Article Open access 22 March 2021
  9. Feeder-Dependent/Independent Mouse Embryonic Stem Cell Culture Protocol

    Mouse embryonic stem cells (mESCs) were first derived and cultured nearly 30 years ago and have been beneficial tools to create transgenic mice and...
    Hatice Burcu Şişli, Selinay Şenkal, ... Ayşegül Doğan in Embryonic Stem Cell Protocols
    Protocol 2021
  10. Microbiological and Biomolecular Methods Applicable to the Isolation, Characterization and Identification of Microbial Sourdough Strains

    The use of sourdough in high-quality fermentation processes is characterized by a microbiome composed of bacteria and yeasts cohabiting in a certain...
    Antonio A. Câmara, Larissa P. Margalho, ... Anderson S. Sant’Ana in Sourdough Microbiota and Starter Cultures for Industry
    Chapter 2024
  11. Methods Used for Studying Human Microbiome

    Human microbiome is a complex and dynamic component of the human system. Identifying the members of this vast community and elucidating their...
    Chinmayi Joshi, Vijay Kothari in Probiotics, Prebiotics, Synbiotics, and Postbiotics
    Chapter 2023
  12. Media matters: culture medium-dependent hypervariable phenotype of mesenchymal stromal cells

    Background

    Despite a long history of investigation and sustained efforts in clinical testing, the number of market authorisations for mesenchymal...

    Joan C. Fitzgerald, Georgina Shaw, ... Frank Barry in Stem Cell Research & Therapy
    Article Open access 12 December 2023
  13. Diverse key nitrogen cycling genes nifH, nirS and nosZ associated with Pichavaram mangrove rhizospheres as revealed by culture-dependent and culture-independent analyses

    Mangroves are highly productive unique ecosystems harboring diverse unexplored microbial communities that play crucial roles in nutrient cycling as...

    Viswanathan Baskaran, V. R. Prabavathy in Archives of Microbiology
    Article 03 January 2022
  14. Measuring frequency-dependent selection in culture

    The frequency of a cultural trait can influence its tendency to be copied. We develop a maximum-likelihood method to measure such frequency-dependent...

    Mitchell G. Newberry, Joshua B. Plotkin in Nature Human Behaviour
    Article 30 May 2022
  15. Overcoming BCR::ABL1 dependent and independent survival mechanisms in chronic myeloid leukaemia using a multi-kinase targeting approach

    Background

    Despite improved patient outcome using tyrosine kinase inhibitors (TKIs), chronic myeloid leukaemia (CML) patients require life-long...

    Caroline Busch, Theresa Mulholland, ... Helen Wheadon in Cell Communication and Signaling
    Article Open access 29 November 2023
  16. Bone morphogenetic protein 4 inhibits rat stem/progenitor Leydig cell development and regeneration via SMAD-dependent and SMAD-independent signaling

    Bone morphogenetic protein 4 (BMP4) is an important member of the transforming growth factor-β superfamily. BMP4 is expressed in the Leydig cell...

    **aoheng Li, Yinghui Fang, ... Ren-Shan Ge in Cell Death & Disease
    Article Open access 13 December 2022
  17. Promoting genotype-independent plant transformation by manipulating developmental regulatory genes and/or using nanoparticles

    Key message

    This review summarizes the molecular basis and emerging applications of developmental regulatory genes and nanoparticles in plant...

    Tingwei Yan, Quancan Hou, ... **angyuan Wan in Plant Cell Reports
    Article Open access 14 June 2023
  18. ACE2-dependent and -independent SARS-CoV-2 entries dictate viral replication and inflammatory response during infection

    Excessive inflammation is the primary cause of mortality in patients with severe COVID-19, yet the underlying mechanisms remain poorly understood....

    Tianhao Duan, Changsheng **ng, ... Rong-Fu Wang in Nature Cell Biology
    Article 21 March 2024
  19. Assessment of Placental Sodium-Independent Leucine Uptake and Transfer in Trophoblast Cells

    The placenta maintains the balance between nutrition and growth control of the fetus through selective and regulated supply of macronutrients such as...
    Jonas Zaugg, Christiane Albrecht in Trophoblasts
    Protocol 2024
  20. Isolation and Identification of Growth-Promoting Bacteria from Plants Growing Under Abiotic Stresses

    Identification and isolation of plant growth-promoting bacteria (PGPB) are critical steps toward understanding the role of these bacteria in stress...
    Mahmoud W. Yaish in Plant Stress Tolerance
    Protocol 2024
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