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  1. Identification of novel marker-trait associations and candidate genes for combined low phosphorus and nitrogen-deficient conditions in rice at seedling stage

    Rice responds to individual N and P deficiencies through root traits’ modifications and characteristic starvation responses. The genomic regions...

    Parameswaran Chidambaranathan, Shivraj Sahu, ... Lambodar Behera in Tropical Plant Biology
    Article 26 June 2024
  2. Integrated analysis of mRNAs and lncRNAs reveals candidate marker genes and potential hub lncRNAs associated with growth regulation of the Pacific Oyster, Crassostrea gigas

    Background

    The Pacific oyster, Crassostrea gigas , is an economically important shellfish around the world. Great efforts have been made to improve...

    Yong**g Li, Ben Yang, ... Shikai Liu in BMC Genomics
    Article Open access 10 August 2023
  3. QTL and Candidate Genes for Flax Disease Resistance

    Rust, pasmo (PAS), powdery mildew (PM), and Fusarium wilt (FW) are four major diseases of flax, causing yield losses as well as seed and fiber...
    Chunfang Zheng, Khalid Y. Rashid, ... Frank M. You in The Flax Genome
    Chapter 2023
  4. Trait Map**, Marker-Assisted Selection, and Introgression Breeding in Pearl Millet

    Pearl millet (Pennisetum glaucum (l.) R. Br.) is a staple food crop in the arid and semi-arid tropics that is gaining importance as a...
    Divya Ramesh, Swati Singh, ... Nepolean Thirunavukkarasu in Pearl Millet in the 21st Century
    Chapter 2024
  5. Marker-Assisted Selection in Wheat

    Wheat is the world’s leading cereal grain crop, widely used due to its social and economic value. Wheat can grow in a wide range of climatic...
    Madiha Habib, Aiman Hina, ... Abdul Qayyum in Advances in Wheat Breeding
    Chapter 2024
  6. Marker-Assisted Breeding in Vegetable Crops

    Molecular markers have great potential to improve the efficiency and precision of conventional plant breeding through marker-assisted selection...
    Anirban Maji, Shouvik Gorai, ... Pritam Roy in Molecular Marker Techniques
    Chapter 2023
  7. Integrated meta-analysis and transcriptomics pinpoint genomic loci and novel candidate genes associated with submergence tolerance in rice

    Background

    Due to rising costs, water shortages, and labour shortages, farmers across the globe now prefer a direct seeding approach. However,...

    Kelvin Dodzi Aloryi, Nnaemeka Emmanuel Okpala, ... **aohai Tian in BMC Genomics
    Article Open access 04 April 2024
  8. Meta-analysis of Map** Studies: Integrating QTLs Towards Candidate Gene Discovery

    Meta-analysis consists of pooling results from multiple studies, and allows prediction of more precise and meaningful data. A plethora of QTL map**...
    Anita Kumari, Divya Sharma, ... Manu Agarwal in Genomics Data Analysis for Crop Improvement
    Protocol 2024
  9. Candidate genes and proteins regulating bull semen quality: a review

    Poor semen profile reflected by suboptimum fertility statistics is a concern in bulls reared for breeding purpose. A critical review of research on...

    Ayan Mukherjee, Jaganmohanarao Gali, ... Amlan Kumar Patra in Tropical Animal Health and Production
    Article 20 May 2023
  10. Development of an SNP marker set for marker-assisted backcrossing using genoty**-by-sequencing in tetraploid perilla

    High-quality molecular markers are essential for marker-assisted selection to accelerate breeding progress. Compared with diploid species, recently...

    Jae-Eun Oh, Ji-Eun Kim, ... Jeong-Hee Lee in Molecular Genetics and Genomics
    Article 19 September 2023
  11. Genome-wide association and targeted transcriptomic analyses reveal loci and candidate genes regulating preharvest sprouting in barley

    Key message

    Genome-wide association study of diverse barley genotypes identified loci, single nucleotide polymorphisms and candidate genes that...

    Gurkamal Kaur, Parneet K. Toora, ... Belay T. Ayele in Theoretical and Applied Genetics
    Article 29 August 2023
  12. Candidate genes associated with reproductive traits in rabbits

    In the era of scientific advances and genetic progress, opportunities in the livestock sector are constantly growing. The application of...

    Mostafa Helal, Jana Sameh, ... Mohamed Ragab in Tropical Animal Health and Production
    Article Open access 05 March 2024
  13. Marker Assisted Recurrent Selection for Crop Improvement

    Recurrent selection seeks to alter quantitatively transmitted traits in a specific way by gradually increasing the frequency of favourable alleles in...
    Suvarna, K. Ashwini, R. Yashaswini in Molecular Marker Techniques
    Chapter 2023
  14. A candidate competitive ELISA based on monoclonal antibody 3A8 for diagnosis of contagious bovine pleuropneumonia

    Abstract

    For the development of a competitive ELISA (cELISA) to detect serum antibodies against the Mycoplasma mycoides subsp. Mycoides ( Mmm ) (strain...

    Qi Wu, Zhixin Ma, ... Qingyuan Xu in Applied Microbiology and Biotechnology
    Article Open access 08 April 2024
  15. Identification of genetic loci and candidate genes underlying freezing tolerance in wheat seedlings

    Key message

    Ten stable loci for freezing tolerance (FT) in wheat were detected by genome-wide association analysis. The putative candidate gene TaRPM1-7BL...

    Xu Pan, ** Zhang in Theoretical and Applied Genetics
    Article 24 February 2024
  16. Discovery of new genomic regions and candidate genes implicated in the natural variation of barley peduncle length and plant height

    The cereal plant barley ( Hordeum vulgare ) has high nutritional content and special characteristics that allow it to withstand adverse weather...

    Zenaba Khatir, Samar G. Thabet, ... Ahmad M. Alqudah in Genetic Resources and Crop Evolution
    Article Open access 15 June 2024
  17. Identification and functional marker development of SbPLSH1 conferring purple leaf sheath in sorghum

    Key message

    We identified a SbPLSH1 gene conferring purple leaf sheath in sorghum ( sorghumbicolor (L.) Moench)and developed a functional markerfor it.

    ...
    Puyuan Yang, Yuzhe Bai, ... **hua Chang in Theoretical and Applied Genetics
    Article 21 May 2024
  18. Identification of KASP markers and candidate genes for drought tolerance in wheat using 90K SNP array genoty** of near-isogenic lines targeting a 4BS quantitative trait locus

    Key message

    This study identified a novel SNP and developed a highly efficient KASP marker for drought tolerance in wheat by genoty** NILs targeting...

    Guannan Liu, Dongcheng Liu, ... Guijun Yan in Theoretical and Applied Genetics
    Article Open access 16 August 2023
  19. Molecular characterization of stable QTL and putative candidate genes for grain zinc and iron concentrations in two related wheat populations

    Key message

    Major QTL for grain zinc and iron concentrations were identified on the long arm of chromosomes 2D and 6D. Gene-based KASP markers were...

    Meng**g Sun, Qiaoling Luo, ... Yuanfeng Hao in Theoretical and Applied Genetics
    Article 02 October 2023
  20. Identification and candidate analysis of a new brown planthopper resistance locus in an Indian landrace of rice, paedai kalibungga

    The brown planthopper ( Nilaparvata lugens Stål, BPH) is the most destructive pest of rice ( Oryza sativa L.). Utilizing resistant rice cultivars that...

    Yangdong Ye, Yanan Wang, ... Jie Hu in Molecular Breeding
    Article 20 June 2024
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