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Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial diversity analyses
16S rRNA gene copy number (16S GCN) varies among bacterial species and this variation introduces potential biases to microbial diversity analyses...
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Bacterial Envelope Fractionation
Numerous bioinformatics tools allow predicting the localization of membrane proteins in the outer or inner membrane of Escherichia coli with high...
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Microscopic Counting of the Total Number of Bacteria and Metabolically Active Bacteria in Soil Samples: Their Relationship and Oscillation Dynamics of Number
AbstractExperimental results of daily counting under a microscope for 30 days of prokaryotic cells in preparations from soil samples when stained...
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An improved bacterial mRNA enrichment strategy in dual RNA sequencing to unveil the dynamics of plant-bacterial interactions
BackgroundDual RNA sequencing is a powerful tool that enables a comprehensive understanding of the molecular dynamics underlying plant-microbe...
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Step-by-Step Bacterial Genome Comparison
Thanks to advancements in genome sequencing and bioinformatics, thousands of bacterial genome sequences are available in public databases. This...
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Protein–Protein Interaction: Bacterial Two Hybrid
The bacterial two-hybridBacterial two-hybrid (BACTH, for “Bacterial Adenylate Cyclase-based Two-Hybrid”) system is a simple and fast genetic approach...
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Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
It is believed that wood-rot fungi change their wood decay activities due to influences from co-existing bacterial communities; however, it is...
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Fungal and Bacterial Diseases of Wheat
Wheat (Triticum aestivum L.) is the main staple crop and primary source of starch and energy in human diet. It is grown in over 120 countries in the...
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Effects of heavy metals on bacterial growth parameters in degradation of phenol by an Antarctic bacterial consortium
Antarctica has often been perceived as a pristine continent until the recent few decades as pollutants have been observed accruing in the Antarctic...
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Tributary Inflows to a Regulated River Influence Bacterial Communities and Increase Bacterial Carbon Assimilation
Inflows from unregulated tributaries change the physical, chemical, and biotic conditions in receiving regulated rivers, impacting microbial...
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Phylogenetic Analysis of Bacterial Pathogen Genomes
The development of high-throughput sequencing technology has led to a significant reduction in the time and cost of sequencing whole genomes of...
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Bactericidal bissulfone B7 targets bacterial pyruvate kinase to impair bacterial biology and pathogenicity in plants
The prevention and control of rice bacterial leaf blight (BLB) disease has not yet been achieved due to the lack of effective agrochemicals and...
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Bacterial community in apparently healthy and asymptomatic Eucalyptus trees and those with symptoms of bacterial wilt
Ralstonia solanacearum and R. pseudosolanacearum are well-known bacterial plant pathogens that cause significant losses to both ornamental and...
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Effects of Climate Change on Bacterial and Viral Pathogens
Changes in the hydrosphere, biosphere, and other climatic variables result in climate fluctuations. These are mainly attributed to human factors...
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Blue Native PAGE Analysis of Bacterial Secretion Complexes
Bacterial protein secretion systems serve to translocate substrate proteins across up to three biological membranes, a task accomplished by...
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Bacterial capsules: Occurrence, mechanism, and function
In environments characterized by extended multi-stress conditions, pathogens develop a variety of immune escape mechanisms to enhance their ability...
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Disease-induced changes in bacterial and fungal communities from plant below- and aboveground compartments
AbstractThe plant microbes are an integral part of the host and play fundamental roles in plant growth and health. There is evidence indicating that...
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Bacterial colony size growth estimation by deep learning
The bacterial growth rate is important for pathogenicity and food safety. Therefore, the study of bacterial growth rate over time can provide...
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Quantitative Determination of Antibacterial Activity During Bacterial Coculture
Antibacterial activity assays are an important tool in the assessment of the ability of one bacterium to kill or inhibit the growth of another, for...
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Transitivity and intransitivity in soil bacterial networks
Competition can lead to the exclusion of bacterial taxa when there is a transitive relationship among competitors with a hierarchy of competitive...
