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  1. The non-vesicle cell-free DNA (cfDNA) induces cell transformation associated with horizontal DNA transfer

    Background

    Cell-free DNA (cfDNA) is a source for liquid biopsy used for cancer diagnosis, therapy selection, and disease monitoring due to its...

    D. A. De La Cruz-Sigüenza, J. P. Reyes-Grajeda, ... A. Dueñas-González in Molecular Biology Reports
    Article Open access 22 January 2024
  2. Interseeded alfalfa N2 fixation and transfer to maize are reduced by N fertilizer

    Establishing alfalfa ( Medicago sativa L.) under a maize ( Zea mays L.) silage companion crop is a promising approach for increasing forage production...

    William Osterholz, Matt Ruark, ... John Grabber in Nutrient Cycling in Agroecosystems
    Article 31 March 2023
  3. Exploring combinations of dimensionality reduction, transfer learning, and regularization methods for predicting binary phenotypes with transcriptomic data

    Background

    Numerous transcriptomic-based models have been developed to predict or understand the fundamental mechanisms driving biological phenotypes....

    S. R. Oshternian, S. Loipfinger, ... R. S. N. Fehrmann in BMC Bioinformatics
    Article Open access 26 April 2024
  4. Transfer RNA Fragments, from Structure to Function

    Transfer RNA molecules (tRNAs) are produced from numerous nuclear and mitochondrial genes and are primarily involved in bringing specific amino acid...
    Serafima Dubnov, Hermona Soreq in RNA Structure and Function
    Chapter 2023
  5. Computer-Aided Diagnosis of Complications After Liver Transplantation Based on Transfer Learning

    Abstract

    Liver transplantation is one of the most effective treatments for acute liver failure, cirrhosis, and even liver cancer. The prediction of...

    Ying Zhang, Chenyuan Shangguan, ... Na Chen in Interdisciplinary Sciences: Computational Life Sciences
    Article 25 October 2023
  6. How electron tunneling and uphill excitation energy transfer support photochemistry in Halomicronema hongdechloris

    Halomicronema hongdechloris , the first cyanobacterium reported to produce the red-shifted chlorophyll f (Chl f ) upon acclimation to far-red light,...

    Franz-Josef Schmitt, Anne Hüls, ... Thomas Friedrich in Photosynthesis Research
    Article 10 January 2024
  7. Droplet size and surface hydrophobicity enhance bacterial plasmid transfer rates in microscopic surface wetness

    Conjugal plasmids constitute a major engine for horizontal gene transfer in bacteria, and are key drivers of the spread of antibiotic resistance,...

    Tomer Orevi, Søren J. Sørensen, Nadav Kashtan in ISME Communications
    Article Open access 16 August 2022
  8. Assessment of Placental Sodium-Independent Leucine Uptake and Transfer in Trophoblast Cells

    The placenta maintains the balance between nutrition and growth control of the fetus through selective and regulated supply of macronutrients such as...
    Jonas Zaugg, Christiane Albrecht in Trophoblasts
    Protocol 2024
  9. Horizontal transfer of tRNA genes to mitochondrial plasmids facilitates gene loss from fungal mitochondrial DNA

    Fungal and plant mitochondria are known to exchange DNA with retroviral plasmids. Transfer of plasmid DNA to the organellar genome is best known and...

    Mathijs Nieuwenhuis, Jeroen Groeneveld, Duur K. Aanen in Current Genetics
    Article Open access 30 November 2022
  10. Mitochondrial transfer/transplantation: an emerging therapeutic approach for multiple diseases

    Mitochondria play a pivotal role in energy generation and cellular physiological processes. These organelles are highly dynamic, constantly changing...

    Zonghan Liu, Yi Sun, ... Shuzhe Ding in Cell & Bioscience
    Article Open access 19 May 2022
  11. Demonstration of charge-hold-vent (CHV) and no-vent-fill (NVF) in a simulated propellent storage tank during tank-to-tank cryogen transfer in microgravity

    The space exploration from a low earth orbit to a high earth orbit, then to Moon, Mars, and possibly asteroids and moons of other planets is one of...

    J. N. Chung, Jun Dong, ... Jason Hartwig in npj Microgravity
    Article Open access 06 June 2024
  12. Mycelial nutrient transfer promotes bacterial co-metabolic organochlorine pesticide degradation in nutrient-deprived environments

    Biotransformation of soil organochlorine pesticides (OCP) is often impeded by a lack of nutrients relevant for bacterial growth and/or co-metabolic...

    Nelson Khan, Edward Muge, ... Lukas Y. Wick in The ISME Journal
    Article Open access 27 January 2023
  13. Less variability when growing faster? Experimental assessment of the relationship of growth rate with functional traits of the marine diatom Phaeodactylum tricornutum

    Diversity and its drivers and consequences are at the heart of ecological research. Mostly, studies have focused on different species, but if the...

    Helena Cornelia Laurentia Klip, Cédric Léo Meunier, Maarten Boersma in Hydrobiologia
    Article Open access 08 February 2024
  14. Controlled electron transfer by molecular wires embedded in ultrathin insulating membranes for driving redox catalysis

    Organic bilayers or amorphous silica films of a few nanometer thickness featuring embedded molecular wires offer opportunities for chemically...

    Heinz Frei in Photosynthesis Research
    Article 18 December 2023
  15. Deep transfer learning-based computer vision for real-time harvest period classification and impurity detection of Porphyra haitnensis

    Seaweed has attracted great attention as a healthy and nutritious food. Traditional seaweed processing plants mainly rely on manual visual inspection...

    Zhenchang Gao, **xian Huang, ... Honghao Cai in Aquaculture International
    Article 10 February 2024
  16. STEM enables map** of single-cell and spatial transcriptomics data with transfer learning

    Profiling spatial variations of cellular composition and transcriptomic characteristics is important for understanding the physiology and pathology...

    Minsheng Hao, Erpai Luo, ... Xuegong Zhang in Communications Biology
    Article Open access 06 January 2024
  17. The horizontal gene transfer of perchlorate reduction genomic island in three bacteria from an ecological niche

    Abstract

    Three new strains of dissimilatory perchlorate-reducing bacteria (DPRB), QD19-16, QD1-5, and P3-1, were isolated from an active sludge....

    Hao-Ming Wang, Guang-Rong Hu, ... Fu-Li Li in Applied Microbiology and Biotechnology
    Article 30 December 2023
  18. Oxytetracycline and heavy metals promote the migration of resistance genes in the intestinal microbiome by plasmid transfer

    Horizontal gene transfer (HGT) has been considered the most important pathway to introduce antibiotic resistance genes (ARGs), which seriously...

    **aojun Lin, Chaonan Zhang, ... Yanbin Xu in The ISME Journal
    Article 12 September 2023
  19. Trophic Transfer Efficiency in Lakes

    Trophic transfer efficiency (TTE) is usually calculated as the ratio of production rates between two consecutive trophic levels. Although seemingly...

    Thomas Mehner, Katrin Attermeyer, ... Ursula Gaedke in Ecosystems
    Article Open access 05 July 2022
  20. Phenotype Discrimination Based on Pressure Signals by Transfer Learning Approaches

    Computational Ethology is the study of the animal behavior using advances in the field of Computer Vision and Artificial Intelligence. This field of...
    Marina Aguilar-Moreno, Manuel Graña in Advances in Computational Intelligence
    Conference paper 2023
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