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  1. Real-Time Portable LAMP Assay for a Rapid Detection of Xylella fastidiosa In-Field

    Early diagnosis is part of a decision-making process which in the case of plant diseases may prevent the spread of invasive plant pathogens and...
    Nicola Luchi, Duccio Migliorini, ... Alberto Santini in Plant-Pathogen Interactions
    Protocol 2023
  2. Assessing the effect of sample storage time on viral detection using a rapid and cost-effective CTAB-based extraction method

    Background

    Cassava leaf samples degrade quickly during storage and transportation from distant areas. Proper sampling and efficient, low-cost storage...

    Deogratius Mark, Fred Tairo, ... Reuben Maghembe in Plant Methods
    Article Open access 08 May 2024
  3. Rapid vertical flow technique for the highly sensitive detection of Brucella antibodies with Prussian blue nanoparticle labeling and nanozyme-catalyzed signal amplification

    Brucellosis is a chronic infectious disease caused by Brucella , which is characterized by inflammation of reproductive organs and fetal membranes,...

    Tieying Zhang, **aoyu Ma, ... Feng Shi in World Journal of Microbiology and Biotechnology
    Article 24 November 2022
  4. Can allele-specific loop-mediated isothermal amplification be used for rapid detection of target-site herbicide resistance in Lolium spp.?

    Background

    Herbicide resistance is one of the threats to modern agriculture and its early detection is one of the most effective components for...

    Silvia Panozzo, Silvia Farinati, ... Laura Scarabel in Plant Methods
    Article Open access 07 February 2023
  5. Rapid and Specific Detection of B. melitensis Targeting BMEI1661 Gene Using Loop-mediated Isothermal Amplification (LAMP) Combined With Lateral Flow immunoassay (LFIA)

    B. melitensis is the most pathogenic zoonotic species of Brucella transmitted to animals through fetal secretions, placenta, and vaginal discharges...

    Marcia Ashmi, Bablu Kumar, ... Praveen Singh in Current Microbiology
    Article 22 September 2023
  6. Establishment and application of ERA-LFD method for rapid detection of feline calicivirus

    Abstract

    Feline calicivirus (FCV) has a single-stranded, positive-sense RNA genome, and it is responsible for many infectious respiratory diseases in...

    Di Liu, Yating Zheng, ... Jiasen Liu in Applied Microbiology and Biotechnology
    Article 28 January 2022
  7. Recombinase polymerase amplification combined with lateral flow dipstick for the rapid detection of Chattonella marina

    Chattonella marina (Raphidophyceae) is a common microalgal species that has frequently caused harmful algal blooms (HABs). Here, recombinase...

    Chunyun Zhang, Yuchen Yang, ... Guofu Chen in Journal of Applied Phycology
    Article 13 April 2022
  8. Deep learning and single-cell phenoty** for rapid antimicrobial susceptibility detection in Escherichia coli

    The rise of antimicrobial resistance (AMR) is one of the greatest public health challenges, already causing up to 1.2 million deaths annually and...

    Alexander Zagajewski, Piers Turner, ... Achillefs N. Kapanidis in Communications Biology
    Article Open access 14 November 2023
  9. Rapid and sensitive detection of genome contamination at scale with FCS-GX

    Assembled genome sequences are being generated at an exponential rate. Here we present FCS-GX, part of NCBI’s Foreign Contamination Screen (FCS) tool...

    Alexander Astashyn, Eric S. Tvedte, ... Terence D. Murphy in Genome Biology
    Article Open access 26 February 2024
  10. Development of Simplified Recombinase Polymerase Amplification Assay for Rapid and Robust Detection of Citrus Yellow Vein Clearing Virus

    Citrus is an economically important fruit crop, belongs to family Rutaceae, cultivated commercially in over 130 countries, which holds a leading...

    Nitika Gupta, Rakesh Kumar, ... Virendra Kumar Baranwal in Current Microbiology
    Article 22 February 2024
  11. Development of reverse transcription loop-mediated isothermal amplification (RT-LAMP) for rapid detection of viruses infecting patchouli (Pogostemon cablin)

    Patchouli ( Pogostemon cablin ), a highly valued medicinal plant, suffers significant economic losses following infection with Broad bean wilt virus 2 ...

    Humaira Bano, Jawaid A. Khan in Archives of Microbiology
    Article 23 January 2024
  12. Prevalence of S. aureus and/or MRSA in hospitalized patients with diabetic foot and establishment of LAMP methods for rapid detection of the SCCmec gene

    Background

    Patients with diabetic feet are prone to be infected due to the impaired immune system. However, the prognostic outcome of different...

    Chunxia Qi, **angrong Luo, ... Hao Zhou in BMC Microbiology
    Article Open access 26 January 2024
  13. Prevalence of bacterial infections and the use of multiplex PCR assay for rapid detection of pathogens in cultured fish in Ghana

    The modern and rapid avenue for detecting pathogens provided by molecular genetic techniques including polymerase chain reaction (PCR) was explored...

    Rhoda Lims Diyie, Dennis W. Aheto, ... Kobina Yankson in Archives of Microbiology
    Article 15 June 2022
  14. Development of the Visual Loop-Mediated Isothermal Amplification Combined with Lateral Flow Dipstick (LAMP-LFD) Method for Rapid Detection of Vibrio harveyi in Aquatic Animals

    Abstract

    Vibrio harveyi is a normal flora present in seawater, but in recent years, with large density aquaculture, V. harveyi has become one of the...

    S. H. Cai, Z. Chen, ... Y. S. Lu in Applied Biochemistry and Microbiology
    Article 10 June 2024
  15. A Cas12a-based fluorescent microfluidic system for rapid on-site human papillomavirus diagnostics

    Abstract

    Persistent infection with human papillomavirus (HPV) is the leading cause of cervical cancer, and early diagnosis is crucial for clinical...

    Baicheng Huang, Yufeng Lou, ... **njie Wang in Applied Microbiology and Biotechnology
    Article 26 August 2023
  16. Recombinase-aided amplification combined with lateral flow dipstick for the rapid detection of Amphidinium carterae

    In the context of global climate change, the frequency and duration of harmful algal blooms (HABs) due to eutrophic coastal waters have increased....

    Meiting Xu, Chunyun Zhang, ... Guofu Chen in Journal of Applied Phycology
    Article 02 December 2021
  17. Rapid quantification of miRNAs using dynamic FRET-FISH

    MicroRNAs (miRNAs) are short regulatory RNAs that control gene expression at the post-transcriptional level. Various miRNAs playing important roles...

    Juyoung Kim, Chanshin Kang, ... Sungchul Hohng in Communications Biology
    Article Open access 07 October 2022
  18. HRP-conjugated-nanobody-based cELISA for rapid and sensitive clinical detection of ASFV antibodies

    Abstract

    African swine fever (ASF), which is caused by the ASF virus (ASFV), is a highly contagious hemorrhagic disease that causes high mortality to...

    Huijun Zhao, Jiahui Ren, ... Gai** Zhang in Applied Microbiology and Biotechnology
    Article 25 May 2022
  19. Rapid, sensitive, and specific detection of SARS-CoV-2 in nasopharyngeal swab samples of suspected patients using a novel one-step loop-mediated isothermal amplification (one-step LAMP) technique

    Background

    In the absence of effective antiviral drugs or vaccines, early and accurate detection of SARS-CoV-2 infection is essential to the COVID-19...

    Sayyad Khanizadeh, Asra Malekshahi, ... Shirzad Fallahi in BMC Microbiology
    Article Open access 07 March 2023
  20. Establishment of PCR Assay with Internal Amplification Control for Rapid Detection of Salmonella sp.

    Abstract

    Salmonella sp. specific gene fragment 3335471 was used to establish a PCR-based assay for rapid detection of Salmonella sp. To establish the...

    X. H. Kong, L. Y. Kong, ... X. M. Bie in Applied Biochemistry and Microbiology
    Article 24 September 2021
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