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  1. Molecular characterization of Indian races of Fusarium oxysporum f. sp. lentis (Fol) based on secreted in Xylem (SIX) effector genes and development of a SIX11 gene-based molecular marker for specific detection of Fol

    Fusarium wilt of lentil caused by Fusarium oxysporum f. sp. lentis ( Fol ) is a destructive pathogen limiting lentil production in India. In the...

    K. Nishmitha, Bishnu Maya Bashyal, ... Deeba Kamil in Archives of Microbiology
    Article 02 April 2024
  2. The Role of Molecular Marker Technology in Advancing Eucheumatoid Research

    The ability of molecular markers to detect genetic variations between organisms has led to the advancement in DNA barcoding, biodiagnostics,...
    Ji Tan, Sze-Wan Poong, ... Phaik-Eem Lim in Tropical Phyconomy Coalition Development
    Chapter 2024
  3. Approaches to Marker Gene Identification from Single-Cell RNA-Sequencing Data

    The advent of next-generation sequencing techniques, such as single-cell RNA-sequencing (scRNA-seq), has drastically increased the amount of data...
    Ronnie Y. Li, Wen**g Ma, Zhaohui S. Qin in Handbook of Statistical Bioinformatics
    Chapter 2022
  4. scSorter: assigning cells to known cell types according to marker genes

    On single-cell RNA-sequencing data, we consider the problem of assigning cells to known cell types, assuming that the identities of...

    Hongyu Guo, Jun Li in Genome Biology
    Article Open access 22 February 2021
  5. Regulation of Seed Dormancy Genes in Triticeae Species

    Wild progenitors of Triticeae crops generally have long dormancy periods. Domesticated crops inherited these longer dormancy alleles from their wild...
    Kazuhiro Sato, Shingo Nakamura, Masaya Fujita in Seed Dormancy
    Protocol 2024
  6. Marker gene analysis reveals novel viral genetic diversity in unsaturated soils

    Despite significant advances in knowledge regarding phages in aquatic systems, viruses in soil remain poorly characterized. Particularly, little is...

    Nakul Dar, Charleton P. Thompson, Kurt Williamson in Biology and Fertility of Soils
    Article 08 December 2022
  7. Molecular Characterization and Map** of Stress Resistance Genes Using SNP Platform in Legumes

    Legumes play a vital role in agriculture and food security. Biotic and abiotic stresses are major hurdles for legume production and lower the current...
    Chapter 2023
  8. Molecular marker aided characterization of race specific and non-race specific rust resistance genes in elite wheat (Triticum spp.) germplasm

    Among wheat diseases, leaf (brown) rust caused by Puccinia triticina Eriks. causes more damage to the crop than any other rust. The pathogen is very...

    Dharam Pal, Subodh Kumar, ... Sunil Kumar V. Parmeshwarappa in Australasian Plant Pathology
    Article 14 January 2022
  9. Integrating Marker-Assisted (MAS) and Genomic Selection (GS) for Plant Functional Trait Improvement

    In plant breeding, the combination of genomic selection (GS) and marker-assisted selection (MAS) is a novel method for improving functional traits....
    Shulbhi Verma, A. R. S. S. H. Gupta, ... Akhil Donga in Plant Functional Traits for Improving Productivity
    Chapter 2024
  10. Enhancement of nutritional quality in maize kernel through marker-assisted breeding for vte4, crtRB1, and opaque2 genes

    Traditional maize is poor in vitamin-E [Îħ-tocopherol (Îħ-T): 6–8 ppm], vitamin-A [provitamin-A (proA): 1–2ppm], lysine (0.150–0.2–50%), and tryptophan...

    Firoz Hossain, Sunil K. Jaiswal, ... Hari S. Gupta in Journal of Applied Genetics
    Article 14 July 2023
  11. Identification and functional marker development of SbPLSH1 conferring purple leaf sheath in sorghum

    Key message

    We identified a SbPLSH1 gene conferring purple leaf sheath in sorghum ( sorghumbicolor (L.) Moench)and developed a functional markerfor it.

    ...
    Puyuan Yang, Yuzhe Bai, ... **hua Chang in Theoretical and Applied Genetics
    Article 21 May 2024
  12. Basics of the Molecular Biology: From Genes to Its Function

    The discipline of molecular biology primarily delineates by unravelling the interactions between deoxyribonucleic acid, ribonucleic acid and proteins...
    Ria Mukhopadhyay, Sahanob Nath, ... Somnath Mandal in Genomics Data Analysis for Crop Improvement
    Protocol 2024
  13. A timely, user-friendly, and flexible marker-assisted speed congenics method

    Mice are the most widely used mammalian animal model worldwide. Their use presents many advantages, including our ability to manipulate their genome....

    Anne-Sophie Van Laere, Audrey Tromme, ... Daniel Desmecht in Transgenic Research
    Article 16 October 2023
  14. Molecular map** of two novel cold resistance genes in common wheat by 660K SNP array

    Low temperature and cold damage are natural factors that seriously reduce wheat yield. Thus, how to improve the cold resistance of wheat has been the...

    Chao Lei, Mingzhen Li, ... Yanzhou **e in Molecular Breeding
    Article 22 November 2023
  15. Evaluation of pathotype marker genes in Streptococcus suis isolated from human and clinically healthy swine in Thailand

    Background

    Streptococcus suis is a zoonotic pathogen that causes substantial economic losses in the pig industry and contributes to human infections...

    Anusak Kerdsin, Nichari Bamphensin, ... Nuchsupha Sunthamala in BMC Microbiology
    Article Open access 16 May 2023
  16. Pangenomic genoty** with the marker array

    We present a new method and software tool called rowbowt that applies a pangenome index to the problem of inferring genotypes from short-read...

    Taher Mun, Naga Sai Kavya Vaddadi, Ben Langmead in Algorithms for Molecular Biology
    Article Open access 05 May 2023
  17. Identification of a stable major sucrose-related QTL and diagnostic marker for flavor improvement in peanut

    Key message

    An InDel marker closely linked with a major and stable quantitative trait locus (QTL) on chromosome A08, qSUCA08.2, controlling sucrose...

    Weitao Li, Li Huang, ... Huifang Jiang in Theoretical and Applied Genetics
    Article 23 March 2023
  18. Celloscope: a probabilistic model for marker-gene-driven cell type deconvolution in spatial transcriptomics data

    Spatial transcriptomics maps gene expression across tissues, posing the challenge of determining the spatial arrangement of different cell types....

    Agnieszka Geras, Shadi Darvish Shafighi, ... Ewa Szczurek in Genome Biology
    Article Open access 17 May 2023
  19. JAK2 as a surface marker for enrichment of human pluripotent stem cells-derived ventricular cardiomyocytes

    Background

    Human pluripotent stem cell (hPSC)-derived cardiomyocytes (CMs) hold great promise for cardiac disease modelling, drug discovery and...

    Lee Chuen Liew, Boon Min Poh, ... Boon-Seng Soh in Stem Cell Research & Therapy
    Article Open access 13 December 2023
  20. Start codon targeted (SCoT) polymorphism marker in plant genome analysis: current status and prospects

    Main conclusion

    The present review illustrates a comprehensive overview of the start codon targeted (SCoT) polymorphism marker and their utilization...

    Manoj K. Rai in Planta
    Article 09 January 2023
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