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Showing 41-60 of 5,449 results
  1. Ensemble Machine Learning and Predicted Properties Promote Antimicrobial Peptide Identification

    Abstract

    The emergence of antibiotic-resistant microbes raises a pressing demand for novel alternative treatments. One promising alternative is the...

    Guolun Zhong, Hui Liu, Lei Deng in Interdisciplinary Sciences: Computational Life Sciences
    Article 07 July 2024
  2. Improved Regularized Multi-class Logistic Regression for Gene Classification with Optimal Kernel PCA and HC Algorithm

    A significant challenge in high-dimensional and big data analysis is related to the classification and prediction of the variables of interest. The...
    Nwayyin Najat Mohammed in GeNeDis 2022
    Conference paper 2023
  3. Exploring brain plasticity in developmental dyslexia through implicit sequence learning

    Developmental dyslexia (DD) is defined as difficulties in learning to read even with normal intelligence and adequate educational guidance. Deficits...

    Gaia Olivo, Jonas Persson, Martina Hedenius in npj Science of Learning
    Article Open access 27 May 2024
  4. Computer-Aided Diagnosis of Complications After Liver Transplantation Based on Transfer Learning

    Abstract

    Liver transplantation is one of the most effective treatments for acute liver failure, cirrhosis, and even liver cancer. The prediction of...

    Ying Zhang, Chenyuan Shangguan, ... Na Chen in Interdisciplinary Sciences: Computational Life Sciences
    Article 25 October 2023
  5. Hybrid deep learning approach to improve classification of low-volume high-dimensional data

    Background

    The performance of machine learning classification methods relies heavily on the choice of features. In many domains, feature generation...

    Pegah Mavaie, Lawrence Holder, Michael K. Skinner in BMC Bioinformatics
    Article Open access 07 November 2023
  6. Machine learning provides specific detection of salt and drought stresses in cucumber based on miRNA characteristics

    Background

    Specific detection of the type and severity of plant abiotic stresses helps prevent yield loss by considering timely actions. This study...

    Parvin Mohammadi, Keyvan Asefpour Vakilian in Plant Methods
    Article Open access 08 November 2023
  7. Predicting Microbe-Disease Associations Based on a Linear Neighborhood Label Propagation Method with Multi-order Similarity Fusion Learning

    Abstract

    Computational approaches employed for predicting potential microbe-disease associations often rely on similarity information between microbes...

    Ruibin Chen, Guobo **e, ... Zhenguo Liu in Interdisciplinary Sciences: Computational Life Sciences
    Article 04 March 2024
  8. A stacked deep learning approach for multiclass classification of plant diseases

    Purpose

    Plant diseases are one of the main factors affecting food production and reducing production losses, they must be swiftly identified and...

    Aman Sharma, Raghav Dalmia, ... Rajni Mohana in Plant and Soil
    Article 21 May 2024
  9. Detecting gene–gene interactions from GWAS using diffusion kernel principal components

    Genes and gene products do not function in isolation but as components of complex networks of macromolecules through physical or biochemical...

    Andrew Walakira, Junior Ocira, ... Kristel Van Steen in BMC Bioinformatics
    Article Open access 01 February 2022
  10. Learning single-cell perturbation responses using neural optimal transport

    Understanding and predicting molecular responses in single cells upon chemical, genetic or mechanical perturbations is a core question in biology....

    Charlotte Bunne, Stefan G. Stark, ... Gunnar Rätsch in Nature Methods
    Article Open access 28 September 2023
  11. PrCRS: a prediction model of severe CRS in CAR-T therapy based on transfer learning

    Background

    CAR-T cell therapy represents a novel approach for the treatment of hematologic malignancies and solid tumors. However, its implementation...

    Zhenyu Wei, Chengkui Zhao, ... Weixing Feng in BMC Bioinformatics
    Article Open access 20 May 2024
  12. DeepHLAPred: a deep learning-based method for non-classical HLA binder prediction

    Human leukocyte antigen (HLA) is closely involved in regulating the human immune system. Despite great advance in detecting classical HLA Class I...

    Guohua Huang, **ngyu Tang, Peijie Zheng in BMC Genomics
    Article Open access 23 November 2023
  13. Liraglutide restores impaired associative learning in individuals with obesity

    Survival under selective pressure is driven by the ability of our brain to use sensory information to our advantage to control physiological needs....

    Ruth Hanssen, Lionel Rigoux, ... Marc Tittgemeyer in Nature Metabolism
    Article Open access 17 August 2023
  14. A self-supervised deep learning method for data-efficient training in genomics

    Deep learning in bioinformatics is often limited to problems where extensive amounts of labeled data are available for supervised classification. By...

    Hüseyin Anil Gündüz, Martin Binder, ... Mina Rezaei in Communications Biology
    Article Open access 11 September 2023
  15. Use of kernel dorsal basal pigmentation in the absence of crown pigmentation for haploid classification in maize using R1-nj-based haploid inducers

    Doubled haploid (DH) technology is growingly becoming an integral component of maize breeding programmes worldwide. The currently popular method of...

    R. K. Khulbe, A. Pattanayak, ... Devender Sharma in Cereal Research Communications
    Article 23 January 2022
  16. PlantNh-Kcr: a deep learning model for predicting non-histone crotonylation sites in plants

    Background

    Lysine crotonylation (Kcr) is a crucial protein post-translational modification found in histone and non-histone proteins. It plays a...

    Yanming Jiang, Renxiang Yan, **aofeng Wang in Plant Methods
    Article Open access 15 February 2024
  17. Using transfer learning-based plant disease classification and detection for sustainable agriculture

    Subsistence farmers and global food security depend on sufficient food production, which aligns with the UN's “Zero Hunger,” “Climate Action,” and...

    Wasswa Shafik, Ali Tufail, ... Rosyzie Anna Awg Haji Mohd Apong in BMC Plant Biology
    Article Open access 26 February 2024
  18. Classification of strawberry ripeness stages using machine learning algorithms and colour spaces

    Accurate classification of strawberry ripeness is a crucial aspect of ensuring high-quality food products, optimizing harvesting and storage...

    Sijan Karki, Jayanta Kumar Basak, ... Hyeon Tae Kim in Horticulture, Environment, and Biotechnology
    Article 02 October 2023
  19. A Random Forest-Convolutional Neural Network Deep Learning Model for Predicting the Wholesale Price Index of Potato in India

    The wholesale price index (WPI) is a crucial economic indicator that provides insights into the pricing dynamics of different goods within a country,...

    Soumik Ray, Tufleuddin Biswas, ... Pradeep Mishra in Potato Research
    Article 24 May 2024
  20. A machine learning toolbox for the analysis of sharp-wave ripples reveals common waveform features across species

    The study of sharp-wave ripples has advanced our understanding of memory function, and their alteration in neurological conditions such as epilepsy...

    Andrea Navas-Olive, Adrian Rubio, ... Liset M. de la Prida in Communications Biology
    Article Open access 04 March 2024
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