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Genome folding through loop extrusion by SMC complexes
Genomic DNA is folded into loops and topologically associating domains (TADs), which serve important structural and regulatory roles. It has been...
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Isolation of actin regulatory region from medicinal plants by thermal asymmetric interlaced PCR (TAIL PCR) and its bioinformatic analysis
Although progression of genome-based techniques has been revam** several areas of genetic engineering, reliable and efficient procedures are...
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Bidirectional two-sample mendelian randomization analysis identifies causal associations between age at menarche and sarcopenia-related traits
BackgroundObservational studies have shown that the age of menarche is associated with sarcopenia, but confounding factors make the causal...
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Identification of a candidate gene responsible for male sterility conferred by CMS-T cytoplasm in onion (Allium cepa L.) and development of molecular markers for detection of CMS-T cytoplasm
Cytoplasmic male sterility (CMS) has been exclusively used as an emasculation tool in seed production of hybrids in onion ( Allium cepa L.).Three...
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Develo** Chenopodium ficifolium as a potential B genome diploid model system for genetic characterization and improvement of allotetraploid quinoa (Chenopodium quinoa)
Abstract BackgroundQuinoa ( Chenopodium quinoa ) is a high-value grain known for its excellent nutritional balance. It is an allotetraploid species...
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PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments
Fluorescence in situ hybridization (FISH) allows researchers to visualize the spatial position and quantity of nucleic acids in fixed samples....
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The mitochondrial genome of Faughnia haani (Stomatopoda): novel organization of the control region and phylogenetic position of the superfamily Parasquilloidea
BackgroundStomatopod crustaceans are aggressive marine predators featuring complex compound eyes and powerful raptorial appendages used for...
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Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential
BackgroundPhytophthora cinnamomi is an oomycete pathogen of global relevance. It is considered as one of the most invasive species, which has caused...
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The Effect of Rheumatoid Arthritis on Features Associated with Sarcopenia: A Mendelian Randomization Study
Previous epidemiological evidence suggests rheumatoid arthritis is associated with sarcopenia-related features. However, most of the current evidence...
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Wheat Chromosomal Resources and Their Role in Wheat Research
Bread wheat (Triticum aestivum L.) is grown on more area of land than any other crop, and its global significance is challenged only by rice. Despite...
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Introgressing the Aegilops tauschii genome into wheat as a basis for cereal improvement
Increasing crop production is necessary to feed the world’s expanding population, and crop breeders often utilize genetic variations to improve crop...
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Identification of candidate genes for panicle length in Oryza sativa L. ssp. japonica via genome-wide association study and linkage map**
Panicle length is an important trait for improving panicle architecture and grain yield in rice ( Oryza sativa L.). Two populations were used to...
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Efficient identification of genomic insertions and flanking regions through whole-genome sequencing in three transgenic soybean events
Genomic insertions and flanking regions of transgenes in host genomes constitute a critical component of precise molecular characterization and...
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Mitochondrial Genome of Nonmodel Marine Metazoans by Next-Generation Sequencing (NGS)
Mitochondrial genomes (mtgenome) represent an important source of information for addressing fundamental evolutionary, phylogeographic, systematic,...
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Genomic resources and toolkits for developmental study of whip spiders (Amblypygi) provide insights into arachnid genome evolution and antenniform leg patterning
BackgroundThe resurgence of interest in the comparative developmental study of chelicerates has led to important insights, such as the discovery of a...
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Discovering QTLs related to spot blotch disease in spring wheat (Triticum aestivum L.) genome
Spot blotch (SB) is a major constraint to wheat ( Triticum aestivum L.) production in South Asia's warmer plains. It is also known as leaf blight,...
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HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding
BackgroundDespite marked recent improvements in long-read sequencing technology, the assembly of diploid genomes remains a difficult task. A major...
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QTL map** and candidate gene mining of flag leaf size traits in Japonica rice based on linkage map** and genome-wide association study
BackgroundAs one of the most important factors of the japonica rice plant, leaf shape affects the photosynthesis and carbohydrate accumulation...
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Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep
The domestication and subsequent development of sheep are crucial events in the history of human civilization and the agricultural revolution....
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Duckweed Chloroplast Genome Sequencing and Annotation
Duckweed chloroplasts make great contributions to their rapid growth and abundant starch accumulation. The availability of chloroplast genomes will...