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Comparative genomics of an extensively drug resistant strain Klebsiella pneumoniae IITR008 with international high-risk clonal lineage ST147 isolated from river water
Carbapenem resistant Klebsiella pneumoniae causing severe infection resulting in morbidity and mortality have become a global health concern. K....
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Comparative genomics reveals insights into the potential of Lysinibacillus irui as a plant growth promoter
AbstractMembers of the genus Lysinibacillus attract attention for their mosquitocidal, bioremediation, and plant growth-promoting abilities. Despite...
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Delving into the lifestyle of Sundarban Wetland resident, biofilm producing, halotolerant Salinicoccus roseus: a comparative genomics-based intervention
BackgroundMicrobial community played an essential role in ecosystem processes, be it mangrove wetland or other intertidal ecologies. Several...
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Evaluation of homozygosity levels of onion (Allium cepa L.) inbred lines using molecular markers evenly distributed in a high-resolution linkage map
Onion ( Allium cepa L.) is a cross-pollinated crop with severe inbreeding depression. Inbred breeding lines are thus commonly maintained through...
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Comparative mitogenomics of Brachiopods reveals conservatism in articulate species and unusualness in inarticulate species
BackgroundBrachiopods are a phylum of marine invertebrates with over 10,000 fossil species. Today, there are fewer than 500 extant species assigned...
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Genomic features and comparative analysis of a multidrug-resistant Acinetobacter bereziniae strain infecting an animal: a novel emerging one health pathogen?
Acinetobacter bereziniae has recently gained medical notoriety due to its emergence as a multidrug resistance and healthcare-associated pathogen. In...
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CEGA: a method for inferring natural selection by comparative population genomic analysis across species
We developed maximum likelihood method for detecting positive selection or balancing selection using multilocus or genomic polymorphism and...
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Comparative genomic analysis of the human genome and six bat genomes using unsupervised machine learning: Mb-level CpG and TFBS islands
BackgroundEmerging infectious disease-causing RNA viruses, such as the SARS-CoV-2 and Ebola viruses, are thought to rely on bats as natural reservoir...
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Comparative Genomics for Evolutionary Cell Biology Using AMOEBAE: Understanding the Golgi and Beyond
Taking an evolutionary approach to cell biology can yield important new information about how the cell works and how it evolved to do so. This is...
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Comparative single-cell transcriptomic analysis of primate brains highlights human-specific regulatory evolution
Enhanced cognitive function in humans is hypothesized to result from cortical expansion and increased cellular diversity. However, the mechanisms...
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The urgent need to develop a new grassland map in China: based on the consistency and accuracy of ten land cover products
Grasslands are the most dominant terrestrial ecosystem in China, but few national grassland maps have been generated. The grassland resource map...
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Construction of a single nucleotide polymorphism linkage map and identification of quantitative trait loci controlling heat tolerance in cowpea, Vigna unguiculata (L.) Walp
Plant tolerance to heat or high temperature is crucial to crop production, especially in the situation of elevated temperature resulting from global...
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Comparative 3D genome analysis between neural retina and retinal pigment epithelium reveals differential cis-regulatory interactions at retinal disease loci
BackgroundVision depends on the interplay between photoreceptor cells of the neural retina and the underlying retinal pigment epithelium (RPE). Most...
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Molecular insights into Pashmina fiber production: comparative skin transcriptomic analysis of Changthangi goats and sheep
Ladakh, one of the highest inhabited regions globally, hosts the unique Changthangi goat, renowned for producing Pashmina, the world’s most luxurious...
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A new map of the chloroplast genome of Hippophae based on inter- and intraspecific variation analyses of 13 accessions belonging to eight Hippophae species
Sea buckthorn ( Hippophae rhamnoides L.; Elaeagnaceae) is a medicinally and ecologically important deciduous shrub widely distributed in northwest...
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A Physical Map of the Brassica oleracea Genome
After the shared polyploidization events affecting Arabidopsis thaliana, Brassica plants have been further affected by extra events, resulting in...
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Comparative and phylogenetic analysis of the complete chloroplast genomes of ten Pittosporum species from East Asia
Pittosporum (Pittosporaceae) is famous as the ornamental and medical values, which is distributed tropical and subtropical regions of Eastern...
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Multichromosomal mitochondrial genome of Punica granatum: comparative evolutionary analysis and gene transformation from chloroplast genomes
BackgroundPunica granatum is a fundamentally important fruit tree that has important economic, medicinal and ornamental properties. At present, there...
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Expanding Horizons: Role of Biotechnology in MAP Research, Production and Utilization
Plant tissue culture (PTC) plays a vital role in selection, multiplication, and conservation of the critical genotypes of medicinal plants. These...
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Comparative chloroplast genomics reveals the phylogeny and the adaptive evolution of Begonia in China
BackgroundThe Begonia species are common shade plants that are mostly found in southwest China. They have not been well studied despite their...
