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  1. The overexpression of SlBRI1 driven by Atrd29A promoter-transgenic plants improves the chilling stress tolerance of tomato

    Main conclusion

    Overexpression of SlBRI1 driven by the Atrd29A promoter could increase the cold resistance of tomato plants during chilling stress but...

    Dan Wang, Zaijun Yang, ... Shuming Nie in Planta
    Article 04 December 2023
  2. msBERT-Promoter: a multi-scale ensemble predictor based on BERT pre-trained model for the two-stage prediction of DNA promoters and their strengths

    Background

    A promoter is a specific sequence in DNA that has transcriptional regulatory functions, playing a role in initiating gene expression....

    Yazi Li, **aoman Wei, ... Zilong Zhang in BMC Biology
    Article Open access 30 May 2024
  3. Rice WRKY13 TF protein binds to motifs in the promoter region to regulate downstream disease resistance-related genes

    In plants, pathogen resistance is brought about by the binding of certain transcription factor (TF) proteins to the cis -elements of certain target...

    John Lilly Jimmy, Rohit Karn, ... Subramanian Babu in Functional & Integrative Genomics
    Article 20 July 2023
  4. Temporal Control of Promoter Activity During the Caulobacter Cell Cycle

    A cascade of cellular events must occur to allow cells to complete one round of cell division. Such a successful cell division cycle relies on the...
    Chapter 2022
  5. Evaluation of cucumber UBL5 promoter as a tool for transgene expression and genome editing in plants

    Transgene expression and genome editing can help improve cucumber varieties to better respond to climate change. This study aimed to evaluate the...

    Kamonchanok Taway, Issariya Dachphun, ... Anongpat Suttangkakul in Transgenic Research
    Article 23 June 2023
  6. Intra-promoter switch of transcription initiation sites in proliferation signaling-dependent RNA metabolism

    Global changes in transcriptional regulation and RNA metabolism are crucial features of cancer development. However, little is known about the role...

    Joseph W. Wragg, Paige-Louise White, ... Ferenc Müller in Nature Structural & Molecular Biology
    Article Open access 23 November 2023
  7. Repressible Promoter System to Study Essential Genes in Mycobacteria

    Inducible gene expression systems represent powerful tools for studying essential gene function and for validation of drug targets in bacteria. Even...
    Francesca Boldrin, Riccardo Manganelli in Essential Genes and Genomes
    Protocol 2022
  8. A Guide to MethylationToActivity: A Deep Learning Framework That Reveals Promoter Activity Landscapes from DNA Methylomes in Individual Tumors

    Genome-wide DNA methylomes have contributed greatly to tumor detection and subclassification. However, interpreting the biological impact of the DNA...
    Karissa Dieseldorff Jones, Daniel Putnam, ... **ang Chen in Computational Epigenomics and Epitranscriptomics
    Protocol 2023
  9. Improving yield-related traits by editing the promoter of the heading date gene Ehd1 in rice

    Key message

    We developed an efficient promoter editing method to create different weak Ehd1 alleles in elite japonica rice variety ZJ8 with slightly...

    Shengting Li, Yanqiu Luo, ... **gxin Guo in Theoretical and Applied Genetics
    Article 06 November 2023
  10. Functional characterization of GhNAC2 promoter conferring hormone- and stress-induced expression: a potential tool to improve growth and stress tolerance in cotton

    The GhNAC2 transcription factor identified from G. herbaceum improves root growth and drought tolerance through transcriptional reprogramming of...

    Ram Naresh, Richa Srivastava, ... Vidhu A. Sane in Physiology and Molecular Biology of Plants
    Article 01 January 2024
  11. Early intermediates in bacterial RNA polymerase promoter melting visualized by time-resolved cryo-electron microscopy

    During formation of the transcription-competent open complex (RPo) by bacterial RNA polymerases (RNAPs), transient intermediates pile up before...

    Ruth M. Saecker, Andreas U. Mueller, ... Seth A. Darst in Nature Structural & Molecular Biology
    Article 01 July 2024
  12. G-quadruplex structural dynamics at MAPK12 promoter dictates transcriptional switch to determine stemness in breast cancer

    P38γ (MAPK12) is predominantly expressed in triple negative breast cancer cells (TNBC) and induces stem cell (CSC) expansion resulting in decreased...

    Pallabi Sengupta, Anindya Dutta, ... Subhrangsu Chatterjee in Cellular and Molecular Life Sciences
    Article 12 January 2024
  13. Promoter variations of ClERF1 gene determines flesh firmness in watermelon

    Background

    Flesh firmness is a critical factor that influences fruit storability, shelf-life and consumer’s preference as well. However, less is known...

    Yimei Zhou, Qinghui Shen, ... Mingfang Zhang in BMC Plant Biology
    Article Open access 16 April 2024
  14. A nematode-inducible promoter can effectively drives RNAi construct to confer Meloidogyne incognita resistance in tomato

    Key message

    Heterologous expression of a nematode-responsive promoter in tomato successfully driven the RNAi constructs to impart root-knot nematode...

    Yogesh E. Thorat, Tushar K. Dutta, ... Anil Sirohi in Plant Cell Reports
    Article 20 December 2023
  15. Promoter of Nitrate Reductase Gene Behaves Differently Under Salinity Stress in Contrasting Rice Genotype

    Soil salinity is a global agricultural issue that decreases both plant production and survival. Plants synthesize secondary nitrogen metabolites,...

    Pooja Rohilla, Jaya Parkash Yadav in Journal of Plant Growth Regulation
    Article 03 January 2023
  16. CDKN2A promoter methylation enhances self-renewal of glioblastoma stem cells and confers resistance to carmustine

    Background

    Glioblastoma, a highly aggressive form of brain cancer, poses significant challenges due to its resistance to therapy and high recurrence...

    **g Wang, Yan-feng **, ... Wen Su in Molecular Biology Reports
    Article Open access 05 March 2024
  17. Cloning and functional analysis of the promoter of a UDP-glycosyltransferase gene from Panax quinquefolium L.

    Pq3-O-UGT2 is a key UDP-glycosyltransferase gene in the ginsenoside biosynthesis pathway of Panax quinquefolium L. Functional analysis of promoter...

    **gxian Chen, Chao Lu, ... Yanlu Wang in Plant Cell, Tissue and Organ Culture (PCTOC)
    Article 06 March 2023
  18. Identification and validation of chickpea (Cicer arietinum L.) Isoflavone synthase 1 (CaIfs1) promoter conferring pathogen-induced expression

    Chickpea ( Cicer arietinum L.) is the third most economically important food legume in the world. Its production is severely hampered by diseases and...

    Lerissa Sweety Dsilva, Shikha Dixit, ... Probir Kumar Ghosh in Journal of Plant Pathology
    Article 21 May 2024
  19. Identification of a novel promoter region responsible for the embryo-specific expression of SERK1 in pineapple

    Somatic embryogenesis (SE) is a key regeneration process in plant. AcSERK1 is a gene specifically expressed in the early stage of SE in pineapple ( Ana...

    Tao **e, Wei Zhang, ... Yehua He in Horticulture, Environment, and Biotechnology
    Article 22 November 2023
  20. PSG076 Promoter Shows Late Pollen-Specific Activity in Wheat (Triticum aestivum L.)

    Pollen, as the male gametophyte of plants, plays a critical role in plant sexual reproduction. Investigating pollen-specific promoters not only helps...

    Ling Chen, Peipei Su, ... Chunbao Gao in Plant Molecular Biology Reporter
    Article 29 June 2023
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