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  1. A spatiotemporal proteomic map of human adipogenesis

    White adipocytes function as major energy reservoirs in humans by storing substantial amounts of triglycerides, and their dysfunction is associated...

    Felix Klingelhuber, Scott Frendo-Cumbo, ... Natalie Krahmer in Nature Metabolism
    Article Open access 02 April 2024
  2. Comparative Genomics of Actinobacteria

    The class Actinobacteria contains many bacteria relevant to human health and industry; it includes both the most deadly pathogen and also organisms...
    Sushant Parab, Davide Corà, Federico Bussolino in Methods in Actinobacteriology
    Protocol 2022
  3. Pro-MAP: a robust pipeline for the pre-processing of single channel protein microarray data

    Background

    The central role of proteins in diseases has made them increasingly attractive as therapeutic targets and indicators of cellular processes....

    Metoboroghene Oluwaseyi Mowoe, Shaun Garnett, ... Jonathan Michael Blackburn in BMC Bioinformatics
    Article Open access 09 December 2022
  4. Comparative transcriptome analysis reveals transcriptional regulation of anthocyanin biosynthesis in purple radish (Raphanus sativus L.)

    Radish exhibits significant variation in color, particularly in sprouts, leaves, petals, fleshy roots, and other tissues, displaying a range of hues...

    Yi Liu, Chenchen Wang, ... Chen Tan in BMC Genomics
    Article Open access 20 June 2024
  5. Identification of unique transcriptomic signatures through integrated multispecies comparative analysis and WGCNA in bovine oocyte development

    Background

    Cattle ( Bos taurus ) are a major large livestock, however, compared with other species, the transcriptional specificity of bovine oocyte...

    Fa-Li Zhang, Wei-Dong Li, ... **-Feng Zhang in BMC Genomics
    Article Open access 18 May 2023
  6. Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin

    Background

    Taraxacum kok-saghyz Rodin (TKS) is a promising commercial alternative natural rubber (NR) yielding plant. Cultivating TKS with a high NR...

    Yushuang Yang, Bi Qin, ... Shizhong Liu in BMC Genomics
    Article Open access 10 January 2023
  7. Comparative analysis of cell–cell communication at single-cell resolution

    Inference of cell–cell communication from single-cell RNA sequencing data is a powerful technique to uncover intercellular communication pathways,...

    Aaron J. Wilk, Alex K. Shalek, ... Catherine A. Blish in Nature Biotechnology
    Article 11 May 2023
  8. The alliance of genome resources: transforming comparative genomics

    Comparing genomic and biological characteristics across multiple species is essential to using model systems to investigate the molecular and...

    Carol J. Bult, Paul W. Sternberg in Mammalian Genome
    Article Open access 04 September 2023
  9. Herbicide 2,4-dichlorophenoxyacetic acid interferes with MAP kinase signaling in Fusarium graminearum and is inhibitory to fungal growth and pathogenesis

    Plant hormones are important for regulating growth, development, and plant-pathogen interactions. Some of them are inhibitory to growth of fungal...

    Kaili Duan, Qifang Shen, ... Xue Zhang in Stress Biology
    Article Open access 15 August 2023
  10. Emodin and aloe-emodin, two potential molecules in regulating cell migration of skin cells through the MAP kinase pathway and affecting Caenorhabditis elegans thermotolerance

    Background

    Emodin and aloe-emodin are two anthraquinones having positive effects in wound healing. However, their mechanism of action of wound healing...

    Aysenur Gunaydin-Akyildiz, Rabia Sare Yanikoglu, ... Gulacti Topcu in BMC Molecular and Cell Biology
    Article Open access 25 July 2023
  11. A pair of gametologous genes provides further insights into avian comparative cytogenomics

    Exploration of avian gametologous genes, i.e., homologous genes located on both the Z and W chromosomes, provides a crucial information about the...

    Alexei A. Sazanov, Anna L. Sazanova, ... Michael N. Romanov in Biologia
    Article Open access 29 March 2023
  12. Comparative chloroplast genomes of Dactylicapnos species: insights into phylogenetic relationships

    Background

    Dactylicapnos is a climbing herbaceous vine, distributed from the Himalayas to southwestern China, and some of the species have important...

    Shunquan Yang, Juntong Chen, ... Tao Deng in BMC Plant Biology
    Article Open access 29 April 2024
  13. Construction of a resequencing-based high-density genetic map for grape using an interspecific population (Vitis amurensis × Vitis vinifera)

    A high-density genetic map is a prerequisite for marker-assisted selection of crop species. Here, we developed a high-density genetic map of Vitis ...

    Guangli Shi, Dan Sun, ... Jun Ai in Horticulture, Environment, and Biotechnology
    Article 25 July 2022
  14. Multiomics comparative analysis of the maize large grain mutant tc19 identified pathways related to kernel development

    Background

    The mechanism of grain development in elite maize breeding lines has not been fully elucidated. Grain length, grain width and grain weight...

    Qing Cai, Fuchao Jiao, ... **nmei Guo in BMC Genomics
    Article Open access 11 September 2023
  15. A pan-Zea genome map for enhancing maize improvement

    Background

    Maize ( Zea mays L.) is at the vanguard facing the upcoming breeding challenges. However, both a super pan-genome for the Zea genus and a...

    Songtao Gui, Wenjie Wei, ... Jianbing Yan in Genome Biology
    Article Open access 23 August 2022
  16. A palmitoyl transferase chemical–genetic system to map ZDHHC-specific S-acylation

    The 23 human zinc finger Asp-His-His-Cys motif-containing (ZDHHC) S -acyltransferases catalyze long-chain S -acylation at cysteine residues across an...

    Cory A. Ocasio, Marc P. Baggelaar, ... Edward W. Tate in Nature Biotechnology
    Article Open access 08 January 2024
  17. An atlas of rabbit development as a model for single-cell comparative genomics

    Traditionally, the mouse has been the favoured vertebrate model for biomedical research, due to its experimental and genetic tractability. However,...

    Mai-Linh Nu Ton, Daniel Keitley, ... Berthold Göttgens in Nature Cell Biology
    Article 15 June 2023
  18. Spatio-temporal fusion methods for spectral remote sensing: a comprehensive technical review and comparative analysis

    For many years, spectral remote sensing has been essential for research on the Earth’s surface. The data from a single satellite sensor is sometimes...

    Ratnakar Swain, Ananya Paul, Mukunda Dev Behera in Tropical Ecology
    Article 05 September 2023
  19. Comparative analysis of the complete chloroplast genome of endemic Colchicum baytopiorum CD. BRICKELL

    The Colchicum baytopiorum CD. BRICKELL belongs to the Colchicaceae , is a near threatened (NT) species of deciduous arbor endemic to Turkey, a...

    Hande Morgil, Okan Unlu, ... Gul Oz in Brazilian Journal of Botany
    Article 10 June 2024
  20. Comparative genomics reveals insights into the potential of Lysinibacillus irui as a plant growth promoter

    Abstract

    Members of the genus Lysinibacillus attract attention for their mosquitocidal, bioremediation, and plant growth-promoting abilities. Despite...

    Sandra Hilário, Micael F. M. Gonçalves, ... Camilo Ayra-Pardo in Applied Microbiology and Biotechnology
    Article Open access 11 June 2024
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