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Characterization and genome-wide sequence analysis of an ectomycorrhizal fungus Pisolithus albus, a potential source for reclamation of degraded lands
Pisolithus albus is a ubiquitous ectomycorrhizal fungus that establishes symbiosis with a wide range of woody plants around the globe. The symbiotic...
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Draft genome sequencing of halotolerant bacterium Salinicola sp. DM10 unravels plant growth-promoting potentials
In this study, strain DM10 was isolated from mangrove roots and characterized as a halotolerant plant growth-promoting bacterium. Strain DM10...
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Draft genome sequence of 'Candidatus Phytoplasma asteris,’ strain SW86 associated with sandal spike disease (SSD)
The sandal spike disease (SSD), related to ‘Ca . Phytoplasma asteris’ (Aster Yellows group), poses a significant threat to Indian sandalwood ( Santalum...
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Enhanced protein secretion in reduced genome strains of Streptomyces lividans
BackgroundS. lividans TK24 is a popular host for the production of small molecules and the secretion of heterologous protein. Within its large...
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Top-Down Proteomics and Comparative 2D-DIGE Analysis
The combination of large-scale protein separation techniques, sophisticated mass spectrometry, and systems bioinformatics has led to the...
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Draft genome sequence of Streptomyces sp. KD18, isolated from industrial soil
The present study scrutinizes the presence of Streptomyces strains in the soil sample collected from industrial area of Bahadurgarh (Haryana) India....
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Structural Landscape of nsp Coding Genomic Regions of SARS-CoV-2-ssRNA Genome: A Structural Genomics Approach Toward Identification of Druggable Genome, Ligand-Binding Pockets, and Structure-Based Druggability
SARS-CoV-2 has a single-stranded RNA genome (+ssRNA), and synthesizes structural and non-structural proteins (nsps). All 16 nsp are synthesized from...
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Bioinformatic Approach to Investigate Larvae Gut Microbiota Cellulosimicrobium protaetiae via Whole-Genome Analysis
The insect larvae Protaetia brevitarsis seulensis have recently been researched as a nutritious food source and concentrated on their environmental...
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Chloroplast genome sequencing based on genome skimming for identification of Eriobotryae Folium
BackgroundWhole chloroplast genome (cpDNA) sequence is becoming widely used in the phylogenetic studies of plant and species identification, but in...
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Complete genome characterization of chilli veinal mottle virus associated with mosaic and mottling disease of tomato and development of LAMP assay for quick detection
Chilli veinal mottle virus (ChiVMV) is a potyvirus known to cause havoc in many solanaceous crops. Samples from tomato plants exhibiting typical...
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Comprehensive genome analysis of Pseudomonas sp. SWRIQ11, a new plant growth-promoting bacterium that alleviates salinity stress in olive
The study presents the genome analysis of a new Pseudomonas sp. (SWRIQ11), which can alleviate salinity stress effects on growth of olive seedlings...
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Genetic improvement in edible fish: status, constraints, and prospects on CRISPR-based genome engineering
Conventional selective breeding in aquaculture has been effective in genetically enhancing economic traits like growth and disease resistance....
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Complete genome sequence analysis of multi-drug resistant Klebsiella pneumoniae THK strain isolated from aquaculture farm in Kerala, India
The emergence of microorganisms with resistance toward antibiotics has been widely recognized as a growing hazard to public health. Here, we report...
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Genome-wide identification and characterization of microsatellite markers within the Avipoxviruses
Microsatellite markers or Simple Sequence Repeats (SSRs) are gaining importance for molecular characterization of the virus as well as estimation of...
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Microbial Genome Sequencing and Assembly Using Nanopore Sequencers
Microbial genomes are typically several million base pairs in length and are relatively easy to sequence and assemble into a single chromosome, given...
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Reconstruction of a genome-scale metabolic model and in-silico flux analysis of Aspergillus tubingensis: a non-mycotoxinogenic citric acid-producing fungus
BackgroundAspergillus tubingensis is a citric acid-producing fungus that can utilize sugars in hydrolysate of lignocellulosic biomass such as...
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Comparative genomics of seven genomes of genus Idiomarina reveals important halo adaptations and genes for stress response
The genus Idiomarina consists of halophilic and/or haloalkaliphilic organisms. We compared the complete genomes of seven strains of the genus Idiomarina...
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Genome sequencing of Pseudomonas fluorescens phage UFJF_PfSW6: a novel lytic Pijolavirus specie with potential for biocontrol in the dairy industry
The genomic characterization of phages with biocontrol potential against food-related bacteria is essential to future commercial applications. Here,...
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Chemotactic response of p-nitrophenol degrading Pseudomonas asiatica strain PNPG3 through phenotypic and genome sequence-based in silico studies
The Pseudomonas asiatica strain PNPG3 was documented to possess chemotactic potential toward p-nitrophenol (PNP), and other nitroaromatic compounds....
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Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae
Hypervirulent Klebsiella pneumoniae (hvKp) is an important pathotype with enhanced virulence features compared with classical K. pneumoniae (cKp)....
