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Showing 1-20 of 73 results
  1. Exploring the Archaeal Virosphere by Metagenomics

    During the past decade, environmental research has demonstrated that archaea are abundant and widespread in nature and play important ecological...
    Yifan Zhou, Yongjie Wang, ... Mart Krupovic in Viral Metagenomics
    Protocol 2024
  2. Translating the language of giants: translation-related genes as a major contribution of giant viruses to the virosphere

    Giant viruses of amoebas are a remarkable group of viruses. In addition to their large size and peculiar structures, the genetic content of these...

    Rodrigo Araújo Lima Rodrigues, Lorena Christine Ferreira da Silva, Jônatas Santos Abrahão in Archives of Virology
    Article 24 April 2020
  3. Metavirome-assembled genome sequence of a new aquatic RNA virus expands the genus Locarnavirus

    RNA viruses in marine environments have long been recognized as major players in the virosphere. In this study, the complete genome sequence of an...

    Fangxin Lu, Shuang Wu, ... Yongjie Wang in Archives of Virology
    Article 25 October 2023
  4. Highly diverse and unknown viruses may enhance Antarctic endoliths’ adaptability

    Background

    Rock-dwelling microorganisms are key players in ecosystem functioning of Antarctic ice free-areas. Yet, little is known about their...

    Cassandra L. Ettinger, Morgan Saunders, ... Claudia Coleine in Microbiome
    Article Open access 08 May 2023
  5. Virus diversity and activity is driven by snowmelt and host dynamics in a high-altitude watershed soil ecosystem

    Background

    Viruses impact nearly all organisms on Earth, including microbial communities and their associated biogeochemical processes. In soils,...

    Clement Coclet, Patrick O. Sorensen, ... Simon Roux in Microbiome
    Article Open access 27 October 2023
  6. Host and geography impact virus diversity in New Zealand’s longfin and shortfin eels

    The fishing and aquaculture industry is vital for global food security, yet viral diseases can result in mass fish die-off events. Determining the...

    Stephanie J. Waller, Eimear Egan, ... Jemma L. Geoghegan in Archives of Virology
    Article Open access 28 March 2024
  7. Giant virus-related sequences in the 5300-year-old Ötzi mummy metagenome

    Giant viruses have brought new perspectives on the virosphere. They have been increasingly described in humans, including in several metagenomic...

    Gabriel Augusto Pires de Souza, Clara Rolland, ... Philippe Colson in Virus Genes
    Article 10 February 2021
  8. Creating Artificial Viruses Using Self-assembled Proteins and Polypeptides

    Viruses are extraordinary entities that have inspired biomolecular engineers to craft artificial versions of them. Recently, multiple efforts have...
    David Silverio Moreno-Gutierrez, **mena del Toro Rios, Armando Hernandez-Garcia in Physical Virology
    Chapter 2023
  9. VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses

    Background

    Viruses are a significant player in many biosphere and human ecosystems, but most signals remain “hidden” in metagenomic/metatranscriptomic...

    Jiarong Guo, Ben Bolduc, ... Simon Roux in Microbiome
    Article Open access 01 February 2021
  10. Genetics and Genomics of Bacteriophages

    In recent years, advancements in sequencing technology and genome analysis software have broadened the horizons for bacteriophage research. As the...
    Aidan Casey, Aidan Coffey, Olivia McAuliffe in Bacteriophages
    Reference work entry 2021
  11. Taxonomic Classification of Geminiviruses Based on Pairwise Sequence Comparisons

    Geminiviridae is the largest and one of the most diverse families of plant viruses, comprising 14 genera demarcated based on host range, type of...
    João Paulo Herrera da Silva, F. Murilo Zerbini in Plant-Virus Interactions
    Protocol 2024
  12. Exploring the tymovirales landscape through metatranscriptomics data

    Tymovirales is an order of viruses with positive-sense RNA genomes that mostly infect plants, but also fungi and insects. The number of genome...

    Nicolás Bejerman, Humberto Debat in Archives of Virology
    Article 16 June 2022
  13. Molecular characterization of a novel botourmiavirus with inverted complementary termini from the rice blast fungus Magnaporthe oryzae isolate HF04

    A novel positive-sense single-stranded RNA mycovirus, designated as "Magnaporthe oryzae botourmiavirus 10" (MoBV10), was identified in the rice blast...

    Simnin Shuai, Hong Zheng, ... Qingchao Deng in Archives of Virology
    Article 18 June 2022
  14. Freshwater Viral Metagenome Analyses Targeting dsDNA Viruses

    Viral metagenomics is one of the most widely used approaches to study viral population genomics. With the recent development of bioinformatic tools,...
    Kira Moon, Jang-Cheon Cho in Viral Metagenomics
    Protocol 2024
  15. Two novel flavi-like viruses shed light on the plant-infecting koshoviruses

    The family Flaviviridae is composed of viruses with a positive-sense single-stranded RNA genome and includes viruses that are important veterinary...

    Humberto Debat, Nicolás Bejerman in Archives of Virology
    Article 20 June 2023
  16. A remarkably diverse and well-organized virus community in a filter-feeding oyster

    Background

    Viruses play critical roles in the marine environment because of their interactions with an extremely broad range of potential hosts. Many...

    **g-Zhe Jiang, Yi-Fei Fang, ... Dian-Chang Zhang in Microbiome
    Article Open access 07 January 2023
  17. Hepeliviruses in two waterbodies in Berlin, Germany

    The order Hepelivirales comprises RNA viruses of four families ( Alphatetraviridae , Benyviridae , Hepeviridae, and Matonaviridae ). Sequencing of virus...

    Roland Zell, Marco Groth, ... Hans-Christoph Selinka in Archives of Virology
    Article Open access 25 December 2022
  18. Whole-genome sequence analysis of a novel orthobunyavirus isolated in Japan in the 1980s

    Two viruses isolated from Culicoides biting midges in Japan and preserved in a frozen state for over three decades were genetically characterized by...

    Tohru Yanase, Katsunori Murota, Yuto Suda in Archives of Virology
    Article 19 January 2023
  19. Bacteriophage Taxonomy: A Continually Evolving Discipline

    While taxonomy is an often underappreciated branch of science, it serves very important roles. Bacteriophage taxonomy has evolved from a discipline...
    Dann Turner, Evelien M. Adriaenssens, ... Andrew M. Kropinski in Bacteriophage Therapy
    Protocol 2024
  20. Abolishment of morphology-based taxa and change to binomial species names: 2022 taxonomy update of the ICTV bacterial viruses subcommittee

    This article summarises the activities of the Bacterial Viruses Subcommittee of the International Committee on Taxonomy of Viruses for the period of...

    Dann Turner, Andrey N. Shkoporov, ... Evelien M. Adriaenssens in Archives of Virology
    Article Open access 23 January 2023
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