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Inferring chromatin accessibility during murine hematopoiesis through phylogenetic analysis
ObjectiveDiversification of cell types and changes in epigenetic states during cell differentiation processes are important for understanding...
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DNA Barcoding and Phylogenetic Analysis of Ceylon Oak with Other Fruit Plants in Sapindaceae Family
Ceylon oak ( Schleichera oleosa (Lour.) Oken), belonging to Sapindaceae family, is a widely used plant for its medicinal properties. Currently, few...
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Phylogenetic and Recombination Analysis of Animal Coronaviruses
Coronavirus (CoV) is a highly diverse virus family with a broad host range and geographic distribution. When spillover occurs, sometimes it may cause...
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Exploring the diversity and evolution of tombus-like viruses: phylogenetic analysis, recombination events, and suppressor protein homologs
This study focuses on the phylogenetic analysis of previously unclassified tombus-like viruses, which are characterized by the presence of homologs...
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The Complete Mitochondrial Genome of Chilo infuscatellus (Lepidoptera: Pyralidae), and Related Phylogenetic Analysis
The Chilo infuscatellus (Lepidoptera: Pyralidae) is a significant pest of sugarcane in China. The genome-level characteristics of this pest are...
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Comparative Analysis of the Complete Mitochondrial Genomes of Three Sisoridae (Osteichthyes, Siluriformes) and the Phylogenetic Relationships of Sisoridae
The family Sisoridae is one of the largest and most diverse Asiatic catfish families, with most species occurring in the water systems of the...
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Repetitive Sequences, Codon Usage Bias and Phylogenetic Analysis of the Plastome of Miliusa glochidioides
Annonaceae is the largest family in Magnoliales, exhibiting the greatest diversity among and within genera. In this study, we conducted an analysis...
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The complete mitochondrial genome of the rodent flea Nosopsyllus laeviceps: genome description, comparative analysis, and phylogenetic implications
BackgroundFleas are one of the most common and pervasive ectoparasites worldwide, comprising at least 2500 valid species. They are vectors of several...
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Phylogenetic analysis and molecular genetic characteristics of West Nile virus lineage 2 isolates circulating in the Russian Federation
Since its initial detection in Africa, the West Nile virus has disseminated widely across all continents, becoming endemic in numerous countries,...
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Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes
In this study, the complete mitogenomes of Sympis rufibasis , Lacera noctilio , Oxyodes scrobiculata , Mocis undata, and Artena dotata were newly...
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Molecular characterization and phylogenetic analysis of porcine epidemic diarrhea virus in **njiang, China, from 2020 to 2022
In recent years, the pig industry in **njiang, China, has been severely impacted by outbreaks of porcine epidemic diarrhea (PED), despite vaccination...
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Phylogenetic analysis of torque teno virus in Romania: possible evidence of distinct geographical distribution
Torque teno virus (TTV) is highly prevalent, but little is known about its circulation in humans. Here, we investigated the geographical distribution...
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Comparative phylogenetic analysis and transcriptomic profiling of Dengue (DENV-3 genotype I) outbreak in 2021 in Bangladesh
BackgroundThe next-generation sequencing (NGS) technology facilitates in-depth study of host-pathogen metatranscriptome. We, therefore, implicated...
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Porcine epidemic diarrhea virus strain CH/HLJ/18 isolated in China: characterization and phylogenetic analysis
BackgroundPorcine epidemic diarrhea (PED) is an infectious disease of the digestive tract caused by the porcine epidemic diarrhea virus (PEDV),...
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Characterization and phylogenetic analysis of bovine gammaherpesvirus 4 isolated in China, 2022
Bovine gammaherpesvirus 4 (BoHV-4) is a common virus detected in bovine with respiratory disease worldwide. In this study, we identified and...
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Complete genome sequence and phylogenetic analysis of a newly discovered fusagra-like virus infecting Carica papaya in Ecuador
A new fusagra-like virus infecting papaya ( Carica papaya L.) was genetically characterized. The genome of the virus, provisionally named "papaya...
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Phylogenetic analysis and haplotype networking of Hepatozoon felis infecting wild animals in Gir National Park, Gujarat, India
The present study was aimed to determine the phylogenetic relationship, haplotype network, and demographic dynamics of H. felis infecting the...
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Molecular epidemiology and phylogenetic analysis of feline calicivirus in Kunshan, China
Feline calicivirus (FCV) is a highly contagious virus in cats, which typically causes respiratory tract and oral infections. Despite vaccination...
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Simultaneous detection and phylogenetic analysis of porcine epidemic diarrhea virus and porcine circovirus 4 in Henan province, China
Porcine circovirus 4 (PCV4) is a recently discovered circovirus that was first reported in 2019 in several pigs in Hunan province of China and has...
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Molecular Identification, Multigenic Characterization and Phylogenetic Analysis of Ctenocephalides Canis Fleas from Humans and Domestic Animals in Iran
BackgroundFleas belonging to the Pulicidae are prevalent ectoparasites infesting mammals and birds in Iran. This study focused on genetically...
