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  1. Article

    Open Access

    Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction

    Plant cell walls are interwoven structures recalcitrant to degradation. Native and adapted microbiomes can be particularly effective at plant cell wall deconstruction. Although most understanding of biological...

    Lauren M. Tom, Martina Aulitto, Yu-Wei Wu, Kai Deng, Yu Gao, Naijia **ao in Microbiome (2022)

  2. Article

    Open Access

    Characterization of TMAO productivity from carnitine challenge facilitates personalized nutrition and microbiome signatures discovery

    The capability of gut microbiota in degrading foods and drugs administered orally can result in diversified efficacies and toxicity interpersonally and cause significant impact on human health. Production of a...

    Wei-Kai Wu, Suraphan Panyod, Po-Yu Liu, Chieh-Chang Chen, Hsien-Li Kao in Microbiome (2020)

  3. Article

    Open Access

    Metagenomic, phylogenetic, and functional characterization of predominant endolithic green sulfur bacteria in the coral Isopora palifera

    Endolithic microbes in coral skeletons are known to be a nutrient source for the coral host. In addition to aerobic endolithic algae and Cyanobacteria, which are usually described in the various corals and form a...

    Shan-Hua Yang, Kshitij Tandon, Chih-Ying Lu, Naohisa Wada, Chao-Jen Shih in Microbiome (2019)

  4. Article

    Open Access

    MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm

    Recovering individual genomes from metagenomic datasets allows access to uncultivated microbial populations that may have important roles in natural and engineered ecosystems. Understanding the roles of these ...

    Yu-Wei Wu, Yung-Hsu Tang, Susannah G Tringe, Blake A Simmons, Steven W Singer in Microbiome (2014)