6 Result(s)
within
Yu-Wei Wu
English
Computational Biology/Bioinformatics
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Article
Open AccessEnhancing predictions of antimicrobial resistance of pathogens by expanding the potential resistance gene repertoire using a pan-genome-based feature selection approach
Predicting which pathogens might exhibit antimicrobial resistance (AMR) based on genomics data is one of the promising ways to swiftly and precisely identify AMR pathogens. Currently, the most widely used geno...
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Article
Open AccessPangenomeNet: a pan-genome-based network reveals functional modules on antimicrobial resistome for Escherichia coli strains
Discerning genes crucial to antimicrobial resistance (AMR) mechanisms is becoming more and more important to accurately and swiftly identify AMR pathogenic strains. Pangenome-wide association studies (e.g. Sco...
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Article
Prediction of permanent deformation in asphalt pavements using a novel symbiotic organisms search–least squares support vector regression
The prediction of asphalt performance can be very important in terms of increasing service life and performance while saving energy and money. In this study, a new hybrid artificial intelligence (AI) system, S...
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Chapter and Conference Paper
A Novel Abundance-Based Algorithm for Binning Metagenomic Sequences Using l-Tuples
Metagenomics is the study of microbial communities sampled directly from their natural environment, without prior culturing. Among the computational tools recently developed for metagenomic sequence analysis, ...
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Article
Open AccessPhylo-mLogo: an interactive and hierarchical multiple-logo visualization tool for alignment of many sequences
When aligning several hundreds or thousands of sequences, such as epidemic virus sequences or homologous/orthologous sequences of some big gene families, to reconstruct the epidemiological history or their phy...
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Article
Open AccessSinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools
Deluged by the rate and complexity of completed genomic sequences, the need to align longer sequences becomes more urgent, and many more tools have thus been developed. In the initial stage of genomic sequence...
