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  1. Article

    Open Access

    Three-dimensional chromatin reorganization regulates B cell development during ageing

    The contribution of three-dimensional genome organization to physiological ageing is not well known. Here we show that large-scale chromatin reorganization distinguishes young and old bone marrow progenitor (p...

    Fei Ma, Yaqiang Cao, Hansen Du, Fatima Zohra Braikia, Le Zong in Nature Cell Biology (2024)

  2. Article

    Open Access

    HMGB1 prefers to interact with structural RNAs and regulates rRNA methylation modification and translation in HeLa cells

    High-mobility group B1 (HMGB1) is both a DNA binding nuclear factor modulating transcription and a crucial cytokine that mediates the response to both infectious and noninfectious inflammation such as autoimmu...

    Meimei Liao, Jiarui Cao, Wen Chen, Mengwei Wang, Zhihui **, Jia Ye in BMC Genomics (2024)

  3. No Access

    Article

    Spatiotemporal control of RNA metabolism and CRISPR–Cas functions using engineered photoswitchable RNA-binding proteins

    RNA molecules perform various crucial roles in diverse cellular processes, from translating genetic information to decoding the genome, regulating gene expression and catalyzing chemical reactions. RNA-binding...

    Renmei Liu, **g Yao, Siyu Zhou, **g Yang, Yaqiang Zhang, in Nature Protocols (2024)

  4. Article

    Open Access

    Smoldering charcoal detection in forest soil by multiple CO sensors

    Cleaning up residual fires is an important part of forest fire management to avoid the loss of forest resources caused by the recurrence of a residual fire. Existing residual fire detection equipment is mainly...

    Chunmei Yang, Yuning Hou, Tongbin Liu, Yaqiang Ma in Journal of Forestry Research (2023)

  5. No Access

    Chapter and Conference Paper

    Breeding and Efficiency Evaluation of a High-Yielding Cellobiohydrolase Strain

    Objective: Energy and environmental issues are one of the most severe challenges for human survival and development in the 21st century. Therefore, the global interest in develo** lignocellulosic biomass res...

    Wenxuan Zhao, Zhigang Ju, Yaqiang Zheng, Song Mei in Biomedical and Computational Biology (2023)

  6. No Access

    Chapter and Conference Paper

    High-Yielding Laccase Strain Breeding and Optimization of Fermentation Conditions

    Objective: Laccase is a copper-containing polyphenol oxidase, which is widely used in papermaking, food, environmental treatment and bioenergy. At present, white rot fungi is one of the important laccase-produ...

    Wenxuan Zhao, Yaqiang Zheng, Zhigang Ju, Song Mei in Biomedical and Computational Biology (2023)

  7. No Access

    Chapter and Conference Paper

    Screening and Efficacy Evaluation of High-Yielding Manganese Peroxidase Strain

    Background: Lignocellulose resources are abundant, but the utilization of lignocellulose is seriously hindered by the existence of lignin. Microorganisms rely on lignin-degrading enzymes to degrade lignin effi...

    Wenxuan Zhao, Zhigang Ju, Hongxi Shi, Song Mei in Biomedical and Computational Biology (2023)

  8. No Access

    Chapter and Conference Paper

    Extraction, Composition Analysis and Blood Lipid Lowering Activity of Rana chensinensis Ovum Oil

    Objective: Rana chensinensis ovum is one of the main by-products of Rana chensinensis oil, which has a large annual output but has not been fully utilized. Research shows that it contains a variety of bioactive s...

    Wenxuan Zhao, Zhigang Ju, Yaqiang Zheng, Hongxi Shi in Biomedical and Computational Biology (2023)

  9. No Access

    Chapter and Conference Paper

    Research on Craft Optimization of Wheat Straw Pretreatment

    Background: Lignocellulose resources are abundant, but the utilization rate is very low, and wheat straw is one of them. The main reason is that the compact structure of lignin limits the conversion and utiliz...

    Wenxuan Zhao, Hongguan Jiao, Zhigang Ju in Biomedical and Computational Biology (2023)

  10. No Access

    Article

    KCNQ1OT1 promotes genome-wide transposon repression by guiding RNA–DNA triplexes and HP1 binding

    Transposon (de)repression and heterochromatin reorganization are dynamically regulated during cell fate determination and are hallmarks of cellular senescence. However, whether they are sequence specifically r...

    **aoli Zhang, Quanlong Jiang, Jiyang Li, Shiqiang Zhang, Yaqiang Cao in Nature Cell Biology (2022)

  11. Article

    Open Access

    scPCOR-seq enables co-profiling of chromatin occupancy and RNAs in single cells

    Cell-to-cell variation in gene expression is a widespread phenomenon, which may play important roles in cellular differentiation, function, and disease development19. Chromatin is implicated in contributing to t...

    Lixia Pan, Wai Lim Ku, Qingsong Tang, Yaqiang Cao, Keji Zhao in Communications Biology (2022)

  12. No Access

    Article

    The importance of conditionally rare taxa for the assembly and interaction of fungal communities in mangrove sediments

    The fungal communities provide the nutrients and drive the cycles of elements in nature, and the rare fungal taxa are proved to be crucial for these communities in many environments. However, the ecological fu...

    Yaqiang Zuo, Runying Zeng, Chunmiao Tian in Applied Microbiology and Biotechnology (2022)

  13. No Access

    Article

    Enhanced genome editing to ameliorate a genetic metabolic liver disease through co-delivery of adeno-associated virus receptor

    Genome editing through adeno-associated viral (AAV) vectors is a promising gene therapy strategy for various diseases, especially genetic disorders. However, homologous recombination (HR) efficiency is extreme...

    Shuming Yin, Lie Ma, Tingting Shao, Mei Zhang, Yuting Guan in Science China Life Sciences (2022)

  14. No Access

    Article

    Three-dimensional facial-image analysis to predict heterogeneity of the human ageing rate and the impact of lifestyle

    Not all individuals age at the same rate. Methods such as the ‘methylation clock’ are invasive, rely on expensive assays of tissue samples and infer the ageing rate by training on chronological age, which is u...

    **an **a, **ngwei Chen, Gang Wu, Fang Li, Yiyang Wang, Yang Chen in Nature Metabolism (2020)

  15. No Access

    Article

    Characterization of functional transposable element enhancers in acute myeloid leukemia

    Transposable elements (TEs) have been shown to have important gene regulatory functions and their alteration could lead to disease phenotypes. Acute myeloid leukemia (AML) develops as a consequence of a series...

    Yingying Zeng, Yaqiang Cao, Rivka Sukenik Halevy in Science China Life Sciences (2020)

  16. Article

    Open Access

    Midgut microbiota diversity of potato tuber moth associated with potato tissue consumed

    The potato tuber moth (PTM), Phthorimaea operculella (Zeller), is a worldwide pest that feeds on both the leaves and tubers of potato plants. PTM larvae can digest leaves, or tubers, resulting in serious damage t...

    Yaqiang Zheng, Guanli **ao, Wenwu Zhou, Yulin Gao, Zhengyue Li in BMC Microbiology (2020)

  17. Article

    Open Access

    Genome-wide identification of AGO18b-bound miRNAs and phasiRNAs in maize by cRIP-seq

    Argonaute proteins (AGOs) are important players in the regulation of plant development by directing sRNAs to target mRNAs. In maize (Zea mays), AGO18b is a tassel-enriched and grass-specific AGO. Previous studies...

    Wei Sun, Dong Chen, Yaqiang Xue, Lihong Zhai, Dan Zhang, Zheng Cao, Lei Liu in BMC Genomics (2019)

  18. No Access

    Article

    Volatile allelochemicals of Chenopodium ambrosioides L. induced mitochondrion-mediated Ca2+-dependent and Caspase-dependent apoptosis signaling pathways in receptor plant cells

    This study aims to explain the mechanism of action of allelochemical effect of Chenopodium ambrosioides L. volatile oil on mitochondrial characteristics of receptor plants.

    Jiao Li, Yaqiang He, Danwei Ma, Bing He, Yanan Wang, Bin Chen in Plant and Soil (2018)

  19. No Access

    Article

    RNAi as a tool to control the sex ratio of mouse offspring by interrupting Zfx/Zfy genes in the testis

    The objective of this study was to explore a novel method to alter the sex-ratio balance of mouse offspring by silencing the paralogous genes Zfx/Zfy (Zinc finger X/Y-chromosomal transcription factor gene) during...

    YongSheng Zhang, JiFeng **, Bin Jia, **angZu Wang, XuHai Wang in Mammalian Genome (2017)

  20. No Access

    Article

    Biogas slurry use as N fertilizer for two-season Zizania aquatica Turcz. in China

    The development of ecological circular agriculture has been highly encouraged by the Chinese government to recycle agricultural wastes, reduce mineral fertilizer input, and protect the environment. Biogas slur...

    Gui Chen, Guohua Zhao, Hongmei Zhang, Yaqiang Shen in Nutrient Cycling in Agroecosystems (2017)

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