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  1. No Access

    Chapter and Conference Paper

    Design of a Cyclone-Proofing Humanity Simulator Using Programmable Cellular Automata

    In this work, the application of Programmable Cellular Automata (PCA) to model and forecast human survival during cyclones is investigated. Using Moore’s neighbourhood as the primary framework, the study takes...

    Sudhakar Sahoo, Swarnava Saha, Abdullah Kazi in Cellular Automata Technology (2024)

  2. No Access

    Chapter and Conference Paper

    A Dynamical Study on Probabilistic Cellular Automata Related to Whale Optimization Algorithm over Time Series Alignment Problems

    Alignment of time series of different sampling length are a major topic of research. Many techniques and advance models are formed to tackle the problems. When the alignment is of the multi-objective type, it ...

    Tarani Meher, Anuradha Sahoo, Sudhakar Sahoo in Cellular Automata Technology (2024)

  3. Article

    Open Access

    Long non-coding RNA HIF1A-As2 and MYC form a double-positive feedback loop to promote cell proliferation and metastasis in KRAS-driven non-small cell lung cancer

    Lung cancer is the leading cause of cancer-related deaths worldwide. KRAS is the main oncogenic driver in lung cancer that can be activated by gene mutation or amplification, but whether long non-coding RNAs (lnc...

    Kaixin Yang, Wenyang Zhang, Linghui Zhong, Yinan **ao in Cell Death & Differentiation (2023)

  4. No Access

    Chapter and Conference Paper

    Analysis of One-Dimensional 4-State Cellular Automata Rules and DNA Evolutions

    The main purpose of this research article is to analyse the different mutation rules applied in DNA sequences that are characterized by their State Transition diagrams (STDs) and Space-Time diagrams like Cellu...

    Arijit Ghosh, Suchitra Behera in Proceedings of Second Asian Symposium on C… (2023)

  5. No Access

    Chapter and Conference Paper

    Relationship of Two Discrete Dynamical Models: One-Dimensional Cellular Automata and Integral Value Transformations

    Automaton(CA) and an Integral Value Transformation(IVT) are two well established mathematical models which evolve in discrete time steps. Theoretically, studies on CA suggest that CA is capable of pro...

    Sreeya Ghosh, Sudhakar Sahoo in Proceedings of First Asian Symposium on Ce… (2022)

  6. No Access

    Article

    AMPKα loss promotes KRAS-mediated lung tumorigenesis

    AMP-activated protein kinase (AMPK) is a critical sensor of energy status that coordinates cell growth with energy balance. In non-small cell lung cancer (NSCLC) the role of AMPKα is controversial and its cont...

    Manuela La Montagna, Lei Shi, Peter Magee, Sudhakar Sahoo in Cell Death & Differentiation (2021)

  7. Article

    Open Access

    A KRAS-responsive long non-coding RNA controls microRNA processing

    Wild-type KRAS (KRASWT) amplification has been shown to be a secondary means of KRAS activation in cancer and associated with poor survival. Nevertheless, the precise role of KRASWT overexpression in lung cancer ...

    Lei Shi, Peter Magee, Matteo Fassan, Sudhakar Sahoo, Hui Sun Leong in Nature Communications (2021)

  8. Article

    Open Access

    Analysis of circulating cell-free DNA identifies KRAS copy number gain and mutation as a novel prognostic marker in Pancreatic cancer

    Serial biopsy of pancreatic ductal adenocarcinoma (PDAC), to chart tumour evolution presents a significant challenge. We examined the utility of circulating free DNA (cfDNA) as a minimally invasive approach ac...

    Sumitra Mohan, Mahmood Ayub, Dominic G. Rothwell, Sakshi Gulati in Scientific Reports (2019)

  9. Article

    Open Access

    Signaling pathway screening platforms are an efficient approach to identify therapeutic targets in cancers that lack known driver mutations: a case report for a cancer of unknown primary origin

    Precision medicine aims to tailor cancer therapies to target specific tumor-promoting aberrations. For tumors that lack actionable drivers, which occurs frequently in the clinic, extensive molecular characteri...

    Pedro Torres-Ayuso, Sudhakar Sahoo, Garry Ashton, Elvira An in npj Genomic Medicine (2018)

  10. Article

    Open Access

    KRAS induces lung tumorigenesis through microRNAs modulation

    Oncogenic KRAS induces tumor onset and development by modulating gene expression via different molecular mechanisms. MicroRNAs (miRNAs) are small non-coding RNAs that have been established as main players in tumo...

    Lei Shi, Justin Middleton, Young-Jun Jeon, Peter Magee in Cell Death & Disease (2018)

  11. Article

    Open Access

    PDGFR-modulated miR-23b cluster and miR-125a-5p suppress lung tumorigenesis by targeting multiple components of KRAS and NF-kB pathways

    In NSCLC alterations in PDGF receptors are markers of worst prognosis and efficient targeting of these receptors is yet to be achieved. In this study, we explored PDGFR-regulated microRNAs demonstrating that m...

    Srivatsava Naidu, Lei Shi, Peter Magee, Justin D. Middleton in Scientific Reports (2017)